Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZCT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZCT entry

There are 3 chains in PDB entry 9ZCT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5THR 660
B
 LEU 525ARG 791
C
 ILE 169SER 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 50 helices in PDB entry 9ZCT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 27Right-handed alpha
Helix 2
AA2
A
36 47Right-handed alpha
Helix 3
AA3
A
48 55Right-handed alpha
Helix 4
AA4
A
64 66Right-handed 310
Helix 5
AA5
A
83 101Right-handed alpha
Helix 6
AA6
A
116 127Right-handed alpha
Helix 7
AA7
A
128 130Right-handed 310
Helix 8
AA8
A
155 162Right-handed alpha
Helix 9
AA9
A
166 184Right-handed alpha
Helix 10
AB1
A
193 214Right-handed alpha
Helix 11
AB2
A
239 241Right-handed 310
Helix 12
AB3
A
242 247Right-handed alpha
Helix 13
AB4
A
251 260Right-handed alpha
Helix 14
AB5
A
306 314Right-handed alpha
Helix 15
AB6
A
316 318Right-handed 310
Helix 16
AB7
A
319 337Right-handed alpha
Helix 17
AB8
A
343 379Right-handed alpha
Helix 18
AB9
A
380 396Right-handed alpha
Helix 19
AC1
A
398 401Right-handed 310
Helix 20
AC2
A
402 412Right-handed alpha
Helix 21
AC3
A
415 430Right-handed alpha
Helix 22
AC4
A
434 450Right-handed alpha
Helix 23
AC5
A
452 463Right-handed alpha
Helix 24
AC6
A
491 499Right-handed alpha
Helix 25
AC7
A
513 519Right-handed 310
Helix 26
AC8
A
523 534Right-handed alpha
Helix 27
AC9
A
534 544Right-handed alpha
Helix 28
AD1
A
565 570Right-handed alpha
Helix 29
AD2
A
613 627Right-handed alpha
Helix 30
AD3
A
642 649Right-handed alpha
Helix 31
AD4
B
525 529Right-handed 310
Helix 32
AD5
B
531 542Right-handed alpha
Helix 33
AD6
B
544 556Right-handed alpha
Helix 34
AD7
B
557 572Right-handed alpha
Helix 35
AD8
B
573 583Right-handed alpha
Helix 36
AD9
B
584 597Right-handed alpha
Helix 37
AE1
B
605 616Right-handed alpha
Helix 38
AE2
B
618 631Right-handed alpha
Helix 39
AE3
B
635 651Right-handed alpha
Helix 40
AE4
B
657 682Right-handed alpha
Helix 41
AE5
B
689 700Right-handed alpha
Helix 42
AE6
B
702 713Right-handed alpha
Helix 43
AE7
B
716 731Right-handed alpha
Helix 44
AE8
B
733 742Right-handed alpha
Helix 45
AE9
B
750 760Right-handed alpha
Helix 46
AF1
B
762 768Right-handed alpha
Helix 47
AF2
B
769 773Right-handed 310
Helix 48
AF3
B
779 788Right-handed alpha
Helix 49
AF4
C
170 178Right-handed alpha
Helix 50
AF5
C
183 195Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 9ZCT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 62first strand
Strand 2
A
31 35parallel
Strand 3
A
74 80parallel
Strand 4
A
106 112parallel
Strand 5
A
132 136parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 145first strand
Strand 2
A
148 150anti-parallel
Strand 3
A
631 637parallel
Strand 4
A
602 609parallel
Strand 5
A
230 237parallel
Strand 6
A
188 192parallel
Strand 7
A
576 580anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 270first strand
Strand 2
A
297 301anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il