Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZCU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZCU entry

There are 4 chains in PDB entry 9ZCU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 41LYS 1104
B
 LEU 41LYS 1104
C
 LEU 41LYS 1104
D
 LEU 41LYS 1104
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are192 helices in PDB entry 9ZCU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 49Right-handed alpha
Helix 2
AA2
A
125 135Right-handed alpha
Helix 3
AA3
A
158 175Right-handed alpha
Helix 4
AA4
A
186 203Right-handed alpha
Helix 5
AA5
A
218 220Right-handed 310
Helix 6
AA6
A
222 227Right-handed alpha
Helix 7
AA7
A
273 288Right-handed alpha
Helix 8
AA8
A
309 322Right-handed alpha
Helix 9
AA9
A
333 344Right-handed alpha
Helix 10
AB1
A
350 362Right-handed alpha
Helix 11
AB2
A
362 368Right-handed alpha
Helix 12
AB3
A
370 387Right-handed alpha
Helix 13
AB4
A
402 418Right-handed alpha
Helix 14
AB5
A
425 437Right-handed alpha
Helix 15
AB6
A
438 446Right-handed alpha
Helix 16
AB7
A
454 457Right-handed 310
Helix 17
AB8
A
458 468Right-handed alpha
Helix 18
AB9
A
470 479Right-handed alpha
Helix 19
AC1
A
483 488Right-handed alpha
Helix 20
AC2
A
489 499Right-handed alpha
Helix 21
AC3
A
502 516Right-handed alpha
Helix 22
AC4
A
518 533Right-handed alpha
Helix 23
AC5
A
559 571Right-handed alpha
Helix 24
AC6
A
573 582Right-handed alpha
Helix 25
AC7
A
586 602Right-handed alpha
Helix 26
AC8
A
607 636Right-handed alpha
Helix 27
AC9
A
636 645Right-handed alpha
Helix 28
AD1
A
648 652Right-handed 310
Helix 29
AD2
A
655 663Right-handed alpha
Helix 30
AD3
A
665 670Right-handed alpha
Helix 31
AD4
A
671 684Right-handed alpha
Helix 32
AD5
A
691 701Right-handed alpha
Helix 33
AD6
A
702 706Right-handed 310
Helix 34
AD7
A
723 732Right-handed alpha
Helix 35
AD8
A
733 759Right-handed alpha
Helix 36
AD9
A
765 790Right-handed alpha
Helix 37
AE1
A
791 796Right-handed 310
Helix 38
AE2
A
798 817Right-handed alpha
Helix 39
AE3
A
821 853Right-handed alpha
Helix 40
AE4
A
856 889Right-handed alpha
Helix 41
AE5
A
895 905Right-handed alpha
Helix 42
AE6
A
905 913Right-handed alpha
Helix 43
AE7
A
955 980Right-handed alpha
Helix 44
AE8
A
986 988Right-handed 310
Helix 45
AE9
A
989 1007Right-handed alpha
Helix 46
AF1
A
1015 1030Right-handed alpha
Helix 47
AF2
A
1050 1072Right-handed alpha
Helix 48
AF3
A
1078 1104Right-handed alpha
Helix 49
AF4
B
42 49Right-handed alpha
Helix 50
AF5
B
125 135Right-handed alpha
Helix 51
AF6
B
158 175Right-handed alpha
Helix 52
AF7
B
186 203Right-handed alpha
Helix 53
AF8
B
218 220Right-handed 310
Helix 54
AF9
B
222 227Right-handed alpha
Helix 55
AG1
B
273 288Right-handed alpha
Helix 56
AG2
B
309 322Right-handed alpha
Helix 57
AG3
B
333 344Right-handed alpha
Helix 58
AG4
B
350 362Right-handed alpha
Helix 59
AG5
B
362 368Right-handed alpha
Helix 60
AG6
B
370 387Right-handed alpha
Helix 61
AG7
B
402 418Right-handed alpha
Helix 62
AG8
B
425 437Right-handed alpha
Helix 63
AG9
B
438 446Right-handed alpha
Helix 64
AH1
B
454 457Right-handed 310
Helix 65
AH2
B
458 468Right-handed alpha
Helix 66
AH3
B
470 479Right-handed alpha
Helix 67
AH4
B
483 488Right-handed alpha
Helix 68
AH5
B
489 499Right-handed alpha
Helix 69
AH6
B
502 516Right-handed alpha
Helix 70
AH7
B
518 533Right-handed alpha
Helix 71
AH8
B
559 571Right-handed alpha
Helix 72
AH9
B
573 582Right-handed alpha
Helix 73
AI1
B
586 602Right-handed alpha
Helix 74
AI2
B
607 636Right-handed alpha
Helix 75
AI3
B
636 645Right-handed alpha
Helix 76
AI4
B
648 652Right-handed 310
Helix 77
AI5
B
655 663Right-handed alpha
Helix 78
AI6
B
665 670Right-handed alpha
Helix 79
AI7
B
671 684Right-handed alpha
Helix 80
AI8
B
691 701Right-handed alpha
Helix 81
AI9
B
702 706Right-handed 310
Helix 82
AJ1
B
723 732Right-handed alpha
Helix 83
AJ2
B
733 759Right-handed alpha
Helix 84
AJ3
B
765 790Right-handed alpha
Helix 85
AJ4
B
791 796Right-handed 310
Helix 86
AJ5
B
798 817Right-handed alpha
Helix 87
AJ6
B
821 853Right-handed alpha
Helix 88
AJ7
B
856 889Right-handed alpha
Helix 89
AJ8
B
895 905Right-handed alpha
Helix 90
AJ9
B
905 913Right-handed alpha
Helix 91
AK1
B
955 980Right-handed alpha
Helix 92
AK2
B
986 988Right-handed 310
Helix 93
AK3
B
989 1007Right-handed alpha
Helix 94
AK4
B
1015 1030Right-handed alpha
Helix 95
AK5
B
1050 1072Right-handed alpha
Helix 96
AK6
B
1078 1104Right-handed alpha
Helix 97
AK7
C
42 49Right-handed alpha
Helix 98
AK8
C
125 135Right-handed alpha
Helix 99
AK9
C
158 175Right-handed alpha
Helix 100
AL1
C
186 203Right-handed alpha
Helix 101
AL2
C
218 220Right-handed 310
Helix 102
AL3
C
222 227Right-handed alpha
Helix 103
AL4
C
273 288Right-handed alpha
Helix 104
AL5
C
309 322Right-handed alpha
Helix 105
AL6
C
333 344Right-handed alpha
Helix 106
AL7
C
350 362Right-handed alpha
Helix 107
AL8
C
362 368Right-handed alpha
Helix 108
AL9
C
370 387Right-handed alpha
Helix 109
AM1
C
402 418Right-handed alpha
Helix 110
AM2
C
425 437Right-handed alpha
Helix 111
AM3
C
438 446Right-handed alpha
Helix 112
AM4
C
454 457Right-handed 310
Helix 113
AM5
C
458 468Right-handed alpha
Helix 114
AM6
C
470 479Right-handed alpha
Helix 115
AM7
C
483 488Right-handed alpha
Helix 116
AM8
C
489 499Right-handed alpha
Helix 117
AM9
C
502 516Right-handed alpha
Helix 118
AN1
C
518 533Right-handed alpha
Helix 119
AN2
C
559 571Right-handed alpha
Helix 120
AN3
C
573 582Right-handed alpha
Helix 121
AN4
C
586 602Right-handed alpha
Helix 122
AN5
C
607 636Right-handed alpha
Helix 123
AN6
C
636 645Right-handed alpha
Helix 124
AN7
C
648 652Right-handed 310
Helix 125
AN8
C
655 663Right-handed alpha
Helix 126
AN9
C
665 670Right-handed alpha
Helix 127
AO1
C
671 684Right-handed alpha
Helix 128
AO2
C
691 701Right-handed alpha
Helix 129
AO3
C
702 706Right-handed 310
Helix 130
AO4
C
723 732Right-handed alpha
Helix 131
AO5
C
733 759Right-handed alpha
Helix 132
AO6
C
765 790Right-handed alpha
Helix 133
AO7
C
791 796Right-handed 310
Helix 134
AO8
C
798 817Right-handed alpha
Helix 135
AO9
C
821 853Right-handed alpha
Helix 136
AP1
C
856 889Right-handed alpha
Helix 137
AP2
C
895 905Right-handed alpha
Helix 138
AP3
C
905 913Right-handed alpha
Helix 139
AP4
C
955 980Right-handed alpha
Helix 140
AP5
C
986 988Right-handed 310
Helix 141
AP6
C
989 1007Right-handed alpha
Helix 142
AP7
C
1015 1030Right-handed alpha
Helix 143
AP8
C
1050 1072Right-handed alpha
Helix 144
AP9
C
1078 1104Right-handed alpha
Helix 145
AQ1
D
42 49Right-handed alpha
Helix 146
AQ2
D
125 135Right-handed alpha
Helix 147
AQ3
D
158 175Right-handed alpha
Helix 148
AQ4
D
186 203Right-handed alpha
Helix 149
AQ5
D
218 220Right-handed 310
Helix 150
AQ6
D
222 227Right-handed alpha
Helix 151
AQ7
D
273 288Right-handed alpha
Helix 152
AQ8
D
309 322Right-handed alpha
Helix 153
AQ9
D
333 344Right-handed alpha
Helix 154
AR1
D
350 362Right-handed alpha
Helix 155
AR2
D
362 368Right-handed alpha
Helix 156
AR3
D
370 387Right-handed alpha
Helix 157
AR4
D
402 418Right-handed alpha
Helix 158
AR5
D
425 437Right-handed alpha
Helix 159
AR6
D
438 446Right-handed alpha
Helix 160
AR7
D
454 457Right-handed 310
Helix 161
AR8
D
458 468Right-handed alpha
Helix 162
AR9
D
470 479Right-handed alpha
Helix 163
AS1
D
483 488Right-handed alpha
Helix 164
AS2
D
489 499Right-handed alpha
Helix 165
AS3
D
502 516Right-handed alpha
Helix 166
AS4
D
518 533Right-handed alpha
Helix 167
AS5
D
559 571Right-handed alpha
Helix 168
AS6
D
573 582Right-handed alpha
Helix 169
AS7
D
586 602Right-handed alpha
Helix 170
AS8
D
607 636Right-handed alpha
Helix 171
AS9
D
636 645Right-handed alpha
Helix 172
AT1
D
648 652Right-handed 310
Helix 173
AT2
D
655 663Right-handed alpha
Helix 174
AT3
D
665 670Right-handed alpha
Helix 175
AT4
D
671 684Right-handed alpha
Helix 176
AT5
D
691 701Right-handed alpha
Helix 177
AT6
D
702 706Right-handed 310
Helix 178
AT7
D
723 732Right-handed alpha
Helix 179
AT8
D
733 759Right-handed alpha
Helix 180
AT9
D
765 790Right-handed alpha
Helix 181
AU1
D
791 796Right-handed 310
Helix 182
AU2
D
798 817Right-handed alpha
Helix 183
AU3
D
821 853Right-handed alpha
Helix 184
AU4
D
856 889Right-handed alpha
Helix 185
AU5
D
895 905Right-handed alpha
Helix 186
AU6
D
905 913Right-handed alpha
Helix 187
AU7
D
955 980Right-handed alpha
Helix 188
AU8
D
986 988Right-handed 310
Helix 189
AU9
D
989 1007Right-handed alpha
Helix 190
AV1
D
1015 1030Right-handed alpha
Helix 191
AV2
D
1050 1072Right-handed alpha
Helix 192
AV3
D
1078 1104Right-handed alpha
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There are 4 sheets in PDB entry 9ZCU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 239first strand
Strand 2
A
105 107parallel
Strand 3
A
115 121anti-parallel
Strand 4
A
259 264parallel
Strand 5
A
210 216parallel
Strand 6
A
177 181parallel
Strand 7
A
144 149parallel
Strand 8
A
301 305parallel
Strand 9
A
326 329parallel
Strand 10
A
391 394parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
237 239first strand
Strand 2
B
105 107parallel
Strand 3
B
115 121anti-parallel
Strand 4
B
259 264parallel
Strand 5
B
210 216parallel
Strand 6
B
177 181parallel
Strand 7
B
144 149parallel
Strand 8
B
301 305parallel
Strand 9
B
326 329parallel
Strand 10
B
391 394parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
237 239first strand
Strand 2
C
105 107parallel
Strand 3
C
115 121anti-parallel
Strand 4
C
259 264parallel
Strand 5
C
210 216parallel
Strand 6
C
177 181parallel
Strand 7
C
144 149parallel
Strand 8
C
301 305parallel
Strand 9
C
326 329parallel
Strand 10
C
391 394parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
237 239first strand
Strand 2
D
105 107parallel
Strand 3
D
115 121anti-parallel
Strand 4
D
259 264parallel
Strand 5
D
210 216parallel
Strand 6
D
177 181parallel
Strand 7
D
144 149parallel
Strand 8
D
301 305parallel
Strand 9
D
326 329parallel
Strand 10
D
391 394parallel
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