Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZCV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZCV entry

There are 4 chains in PDB entry 9ZCV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	LEU 41	LYS 1104
C	LEU 41	LYS 1104
D	LEU 41	LYS 1104
A	LEU 41	LYS 1104

There are208 helices in PDB entry 9ZCV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	41	49	Right-handed alpha
Helix 2	AA2	B	73	78	Right-handed alpha
Helix 3	AA3	B	125	135	Right-handed alpha
Helix 4	AA4	B	158	175	Right-handed alpha
Helix 5	AA5	B	186	203	Right-handed alpha
Helix 6	AA6	B	218	220	Right-handed 310
Helix 7	AA7	B	222	227	Right-handed alpha
Helix 8	AA8	B	274	288	Right-handed alpha
Helix 9	AA9	B	309	322	Right-handed alpha
Helix 10	AB1	B	333	338	Right-handed alpha
Helix 11	AB2	B	340	345	Right-handed alpha
Helix 12	AB3	B	352	362	Right-handed alpha
Helix 13	AB4	B	362	369	Right-handed alpha
Helix 14	AB5	B	370	386	Right-handed alpha
Helix 15	AB6	B	395	399	Right-handed 310
Helix 16	AB7	B	402	418	Right-handed alpha
Helix 17	AB8	B	425	436	Right-handed alpha
Helix 18	AB9	B	438	446	Right-handed alpha
Helix 19	AC1	B	458	468	Right-handed alpha
Helix 20	AC2	B	470	480	Right-handed alpha
Helix 21	AC3	B	483	488	Right-handed alpha
Helix 22	AC4	B	489	499	Right-handed alpha
Helix 23	AC5	B	502	513	Right-handed alpha
Helix 24	AC6	B	518	532	Right-handed alpha
Helix 25	AC7	B	559	571	Right-handed alpha
Helix 26	AC8	B	573	582	Right-handed alpha
Helix 27	AC9	B	586	601	Right-handed alpha
Helix 28	AD1	B	607	635	Right-handed alpha
Helix 29	AD2	B	636	646	Right-handed alpha
Helix 30	AD3	B	649	654	Right-handed 310
Helix 31	AD4	B	655	663	Right-handed alpha
Helix 32	AD5	B	665	670	Right-handed alpha
Helix 33	AD6	B	671	684	Right-handed alpha
Helix 34	AD7	B	691	699	Right-handed alpha
Helix 35	AD8	B	702	707	Right-handed 310
Helix 36	AD9	B	726	732	Right-handed alpha
Helix 37	AE1	B	733	759	Right-handed alpha
Helix 38	AE2	B	765	788	Right-handed alpha
Helix 39	AE3	B	796	818	Right-handed alpha
Helix 40	AE4	B	824	841	Right-handed alpha
Helix 41	AE5	B	841	847	Right-handed alpha
Helix 42	AE6	B	848	850	Right-handed 310
Helix 43	AE7	B	853	864	Right-handed alpha
Helix 44	AE8	B	865	890	Right-handed alpha
Helix 45	AE9	B	895	910	Right-handed alpha
Helix 46	AF1	B	911	913	Right-handed 310
Helix 47	AF2	B	952	969	Right-handed alpha
Helix 48	AF3	B	970	1008	Right-handed alpha
Helix 49	AF4	B	1012	1020	Right-handed alpha
Helix 50	AF5	B	1050	1069	Right-handed alpha
Helix 51	AF6	B	1070	1072	Right-handed 310
Helix 52	AF7	B	1078	1104	Right-handed alpha
Helix 53	AF8	C	42	49	Right-handed alpha
Helix 54	AF9	C	73	78	Right-handed alpha
Helix 55	AG1	C	125	135	Right-handed alpha
Helix 56	AG2	C	158	175	Right-handed alpha
Helix 57	AG3	C	186	203	Right-handed alpha
Helix 58	AG4	C	218	220	Right-handed 310
Helix 59	AG5	C	222	227	Right-handed alpha
Helix 60	AG6	C	274	288	Right-handed alpha
Helix 61	AG7	C	309	322	Right-handed alpha
Helix 62	AG8	C	333	338	Right-handed alpha
Helix 63	AG9	C	340	345	Right-handed alpha
Helix 64	AH1	C	352	362	Right-handed alpha
Helix 65	AH2	C	362	369	Right-handed alpha
Helix 66	AH3	C	370	386	Right-handed alpha
Helix 67	AH4	C	395	399	Right-handed 310
Helix 68	AH5	C	402	418	Right-handed alpha
Helix 69	AH6	C	425	436	Right-handed alpha
Helix 70	AH7	C	438	446	Right-handed alpha
Helix 71	AH8	C	458	468	Right-handed alpha
Helix 72	AH9	C	470	480	Right-handed alpha
Helix 73	AI1	C	483	488	Right-handed alpha
Helix 74	AI2	C	489	499	Right-handed alpha
Helix 75	AI3	C	502	513	Right-handed alpha
Helix 76	AI4	C	518	532	Right-handed alpha
Helix 77	AI5	C	559	571	Right-handed alpha
Helix 78	AI6	C	573	582	Right-handed alpha
Helix 79	AI7	C	586	601	Right-handed alpha
Helix 80	AI8	C	607	635	Right-handed alpha
Helix 81	AI9	C	636	646	Right-handed alpha
Helix 82	AJ1	C	649	654	Right-handed 310
Helix 83	AJ2	C	655	663	Right-handed alpha
Helix 84	AJ3	C	665	670	Right-handed alpha
Helix 85	AJ4	C	671	684	Right-handed alpha
Helix 86	AJ5	C	691	699	Right-handed alpha
Helix 87	AJ6	C	702	707	Right-handed 310
Helix 88	AJ7	C	726	732	Right-handed alpha
Helix 89	AJ8	C	733	759	Right-handed alpha
Helix 90	AJ9	C	765	788	Right-handed alpha
Helix 91	AK1	C	796	818	Right-handed alpha
Helix 92	AK2	C	824	841	Right-handed alpha
Helix 93	AK3	C	841	847	Right-handed alpha
Helix 94	AK4	C	848	850	Right-handed 310
Helix 95	AK5	C	853	864	Right-handed alpha
Helix 96	AK6	C	865	890	Right-handed alpha
Helix 97	AK7	C	895	910	Right-handed alpha
Helix 98	AK8	C	911	913	Right-handed 310
Helix 99	AK9	C	952	969	Right-handed alpha
Helix 100	AL1	C	970	1008	Right-handed alpha
Helix 101	AL2	C	1012	1020	Right-handed alpha
Helix 102	AL3	C	1050	1069	Right-handed alpha
Helix 103	AL4	C	1070	1072	Right-handed 310
Helix 104	AL5	C	1078	1104	Right-handed alpha
Helix 105	AL6	D	42	49	Right-handed alpha
Helix 106	AL7	D	73	78	Right-handed alpha
Helix 107	AL8	D	125	135	Right-handed alpha
Helix 108	AL9	D	158	175	Right-handed alpha
Helix 109	AM1	D	186	203	Right-handed alpha
Helix 110	AM2	D	218	220	Right-handed 310
Helix 111	AM3	D	222	227	Right-handed alpha
Helix 112	AM4	D	274	288	Right-handed alpha
Helix 113	AM5	D	309	322	Right-handed alpha
Helix 114	AM6	D	333	338	Right-handed alpha
Helix 115	AM7	D	340	345	Right-handed alpha
Helix 116	AM8	D	352	362	Right-handed alpha
Helix 117	AM9	D	362	369	Right-handed alpha
Helix 118	AN1	D	370	386	Right-handed alpha
Helix 119	AN2	D	395	399	Right-handed 310
Helix 120	AN3	D	402	418	Right-handed alpha
Helix 121	AN4	D	425	436	Right-handed alpha
Helix 122	AN5	D	438	446	Right-handed alpha
Helix 123	AN6	D	458	468	Right-handed alpha
Helix 124	AN7	D	470	480	Right-handed alpha
Helix 125	AN8	D	483	488	Right-handed alpha
Helix 126	AN9	D	489	499	Right-handed alpha
Helix 127	AO1	D	502	513	Right-handed alpha
Helix 128	AO2	D	518	532	Right-handed alpha
Helix 129	AO3	D	559	571	Right-handed alpha
Helix 130	AO4	D	573	582	Right-handed alpha
Helix 131	AO5	D	586	601	Right-handed alpha
Helix 132	AO6	D	607	635	Right-handed alpha
Helix 133	AO7	D	636	646	Right-handed alpha
Helix 134	AO8	D	649	654	Right-handed 310
Helix 135	AO9	D	655	663	Right-handed alpha
Helix 136	AP1	D	665	670	Right-handed alpha
Helix 137	AP2	D	671	684	Right-handed alpha
Helix 138	AP3	D	691	699	Right-handed alpha
Helix 139	AP4	D	702	707	Right-handed 310
Helix 140	AP5	D	726	732	Right-handed alpha
Helix 141	AP6	D	733	759	Right-handed alpha
Helix 142	AP7	D	765	788	Right-handed alpha
Helix 143	AP8	D	796	818	Right-handed alpha
Helix 144	AP9	D	824	841	Right-handed alpha
Helix 145	AQ1	D	841	847	Right-handed alpha
Helix 146	AQ2	D	848	850	Right-handed 310
Helix 147	AQ3	D	853	864	Right-handed alpha
Helix 148	AQ4	D	865	890	Right-handed alpha
Helix 149	AQ5	D	895	910	Right-handed alpha
Helix 150	AQ6	D	911	913	Right-handed 310
Helix 151	AQ7	D	952	969	Right-handed alpha
Helix 152	AQ8	D	970	1008	Right-handed alpha
Helix 153	AQ9	D	1012	1020	Right-handed alpha
Helix 154	AR1	D	1050	1069	Right-handed alpha
Helix 155	AR2	D	1070	1072	Right-handed 310
Helix 156	AR3	D	1078	1104	Right-handed alpha
Helix 157	AR4	A	42	49	Right-handed alpha
Helix 158	AR5	A	73	78	Right-handed alpha
Helix 159	AR6	A	125	135	Right-handed alpha
Helix 160	AR7	A	158	175	Right-handed alpha
Helix 161	AR8	A	186	203	Right-handed alpha
Helix 162	AR9	A	218	220	Right-handed 310
Helix 163	AS1	A	222	227	Right-handed alpha
Helix 164	AS2	A	274	288	Right-handed alpha
Helix 165	AS3	A	309	322	Right-handed alpha
Helix 166	AS4	A	333	338	Right-handed alpha
Helix 167	AS5	A	340	345	Right-handed alpha
Helix 168	AS6	A	352	362	Right-handed alpha
Helix 169	AS7	A	362	369	Right-handed alpha
Helix 170	AS8	A	370	386	Right-handed alpha
Helix 171	AS9	A	395	399	Right-handed 310
Helix 172	AT1	A	402	418	Right-handed alpha
Helix 173	AT2	A	425	436	Right-handed alpha
Helix 174	AT3	A	438	446	Right-handed alpha
Helix 175	AT4	A	458	468	Right-handed alpha
Helix 176	AT5	A	470	480	Right-handed alpha
Helix 177	AT6	A	483	488	Right-handed alpha
Helix 178	AT7	A	489	499	Right-handed alpha
Helix 179	AT8	A	502	513	Right-handed alpha
Helix 180	AT9	A	518	532	Right-handed alpha
Helix 181	AU1	A	559	571	Right-handed alpha
Helix 182	AU2	A	573	582	Right-handed alpha
Helix 183	AU3	A	586	601	Right-handed alpha
Helix 184	AU4	A	607	635	Right-handed alpha
Helix 185	AU5	A	636	646	Right-handed alpha
Helix 186	AU6	A	649	654	Right-handed 310
Helix 187	AU7	A	655	663	Right-handed alpha
Helix 188	AU8	A	665	670	Right-handed alpha
Helix 189	AU9	A	671	684	Right-handed alpha
Helix 190	AV1	A	691	699	Right-handed alpha
Helix 191	AV2	A	702	707	Right-handed 310
Helix 192	AV3	A	726	732	Right-handed alpha
Helix 193	AV4	A	733	759	Right-handed alpha
Helix 194	AV5	A	765	788	Right-handed alpha
Helix 195	AV6	A	796	818	Right-handed alpha
Helix 196	AV7	A	824	841	Right-handed alpha
Helix 197	AV8	A	841	847	Right-handed alpha
Helix 198	AV9	A	848	850	Right-handed 310
Helix 199	AW1	A	853	864	Right-handed alpha
Helix 200	AW2	A	865	890	Right-handed alpha
Helix 201	AW3	A	895	910	Right-handed alpha
Helix 202	AW4	A	911	913	Right-handed 310
Helix 203	AW5	A	952	969	Right-handed alpha
Helix 204	AW6	A	970	1008	Right-handed alpha
Helix 205	AW7	A	1012	1020	Right-handed alpha
Helix 206	AW8	A	1050	1069	Right-handed alpha
Helix 207	AW9	A	1070	1072	Right-handed 310
Helix 208	AX1	A	1078	1104	Right-handed alpha

There are 12 sheets in PDB entry 9ZCV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	53	first strand
Strand 2	B	96	99	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	214	216	first strand
Strand 2	B	259	264	parallel
Strand 3	B	115	121	parallel
Strand 4	B	104	107	anti-parallel
Strand 5	B	237	239	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	177	180	first strand
Strand 2	B	144	147	parallel
Strand 3	B	301	305	parallel
Strand 4	B	326	328	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	53	first strand
Strand 2	C	96	99	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	214	216	first strand
Strand 2	C	259	264	parallel
Strand 3	C	115	121	parallel
Strand 4	C	104	107	anti-parallel
Strand 5	C	237	239	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	177	180	first strand
Strand 2	C	144	147	parallel
Strand 3	C	301	305	parallel
Strand 4	C	326	328	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	53	first strand
Strand 2	D	96	99	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	214	216	first strand
Strand 2	D	259	264	parallel
Strand 3	D	115	121	parallel
Strand 4	D	104	107	anti-parallel
Strand 5	D	237	239	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	177	180	first strand
Strand 2	D	144	147	parallel
Strand 3	D	301	305	parallel
Strand 4	D	326	328	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	53	first strand
Strand 2	A	96	99	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	214	216	first strand
Strand 2	A	259	264	parallel
Strand 3	A	115	121	parallel
Strand 4	A	104	107	anti-parallel
Strand 5	A	237	239	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	180	first strand
Strand 2	A	144	147	parallel
Strand 3	A	301	305	parallel
Strand 4	A	326	328	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZCV

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZCV