Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZDX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZDX entry

There are 2 chains in PDB entry 9ZDX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1PHE 550
A
 ASN 2THR 552
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 9ZDX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
25 35Right-handed alpha
Helix 2
AA2
C
39 53Right-handed alpha
Helix 3
AA3
C
59 65Right-handed 310
Helix 4
AA4
C
77 91Right-handed alpha
Helix 5
AA5
C
104 108Right-handed alpha
Helix 6
AA6
C
115 129Right-handed alpha
Helix 7
AA7
C
137 141Right-handed alpha
Helix 8
AA8
C
148 163Right-handed alpha
Helix 9
AA9
C
168 182Right-handed alpha
Helix 10
AB1
C
183 196Right-handed alpha
Helix 11
AB2
C
198 203Right-handed alpha
Helix 12
AB3
C
204 208Right-handed 310
Helix 13
AB4
C
209 222Right-handed alpha
Helix 14
AB5
C
224 235Right-handed alpha
Helix 15
AB6
C
242 258Right-handed alpha
Helix 16
AB7
C
269 275Right-handed alpha
Helix 17
AB8
C
277 296Right-handed alpha
Helix 18
AB9
C
308 313Right-handed alpha
Helix 19
AC1
C
319 325Right-handed alpha
Helix 20
AC2
C
341 350Right-handed alpha
Helix 21
AC3
C
354 375Right-handed alpha
Helix 22
AC4
C
390 396Right-handed alpha
Helix 23
AC5
C
403 416Right-handed alpha
Helix 24
AC6
C
428 443Right-handed alpha
Helix 25
AC7
C
454 461Right-handed 310
Helix 26
AC8
C
466 476Right-handed alpha
Helix 27
AC9
C
477 479Right-handed 310
Helix 28
AD1
C
484 496Right-handed alpha
Helix 29
AD2
C
505 512Right-handed alpha
Helix 30
AD3
C
520 538Right-handed alpha
Helix 31
AD4
A
3 7Right-handed 310
Helix 32
AD5
A
25 35Right-handed alpha
Helix 33
AD6
A
39 53Right-handed alpha
Helix 34
AD7
A
59 65Right-handed 310
Helix 35
AD8
A
77 91Right-handed alpha
Helix 36
AD9
A
104 108Right-handed alpha
Helix 37
AE1
A
115 128Right-handed alpha
Helix 38
AE2
A
137 141Right-handed alpha
Helix 39
AE3
A
148 163Right-handed alpha
Helix 40
AE4
A
168 182Right-handed alpha
Helix 41
AE5
A
183 196Right-handed alpha
Helix 42
AE6
A
198 203Right-handed alpha
Helix 43
AE7
A
204 206Right-handed 310
Helix 44
AE8
A
209 222Right-handed alpha
Helix 45
AE9
A
224 239Right-handed alpha
Helix 46
AF1
A
242 258Right-handed alpha
Helix 47
AF2
A
269 275Right-handed alpha
Helix 48
AF3
A
277 294Right-handed alpha
Helix 49
AF4
A
308 315Right-handed alpha
Helix 50
AF5
A
324 329Right-handed alpha
Helix 51
AF6
A
341 350Right-handed alpha
Helix 52
AF7
A
354 367Right-handed alpha
Helix 53
AF8
A
369 376Right-handed alpha
Helix 54
AF9
A
390 396Right-handed alpha
Helix 55
AG1
A
401 414Right-handed alpha
Helix 56
AG2
A
428 443Right-handed alpha
Helix 57
AG3
A
453 456Right-handed 310
Helix 58
AG4
A
457 462Right-handed alpha
Helix 59
AG5
A
463 465Right-handed 310
Helix 60
AG6
A
466 477Right-handed alpha
Helix 61
AG7
A
483 496Right-handed alpha
Helix 62
AG8
A
505 513Right-handed alpha
Helix 63
AG9
A
520 538Right-handed alpha
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There are 6 sheets in PDB entry 9ZDX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 136first strand
Strand 2
C
263 268parallel
Strand 3
C
299 306parallel
Strand 4
C
67 72parallel
Strand 5
C
333 337parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
93 95first strand
Strand 2
C
101 103anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
542 543first strand
Strand 2
C
548 549anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 136first strand
Strand 2
A
263 268parallel
Strand 3
A
299 304parallel
Strand 4
A
67 71parallel
Strand 5
A
331 336parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 95first strand
Strand 2
A
101 103anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 544first strand
Strand 2
A
547 550anti-parallel
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