Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZE4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZE4 entry

There are 16 chains in PDB entry 9ZE4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	ALA 321
B	ALA 2	ALA 321
C	ALA 2	ALA 321
D	ALA 2	ALA 321
E	ALA 2	ALA 321
F	ALA 2	ALA 321
G	ALA 2	ALA 321
H	ALA 2	ALA 321
I	ALA 2	ALA 321
J	ALA 2	ALA 321
K	ALA 2	ALA 321
L	ALA 2	ALA 321
M	THR 15	ASN 516
N	GLY 22	GLU 224
O	GLY 22	GLU 224
P	GLY 22	GLU 224

There are128 helices in PDB entry 9ZE4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	7	12	Right-handed alpha
Helix 2	AA2	A	20	27	Right-handed alpha
Helix 3	AA3	A	30	36	Right-handed alpha
Helix 4	AA4	A	43	54	Right-handed alpha
Helix 5	AA5	A	54	68	Right-handed alpha
Helix 6	AA6	A	70	240	Right-handed alpha
Helix 7	AA7	A	253	291	Right-handed alpha
Helix 8	AA8	A	304	320	Right-handed alpha
Helix 9	AA9	B	7	12	Right-handed alpha
Helix 10	AB1	B	20	31	Right-handed alpha
Helix 11	AB2	B	32	34	Right-handed 310
Helix 12	AB3	B	43	54	Right-handed alpha
Helix 13	AB4	B	54	68	Right-handed alpha
Helix 14	AB5	B	70	241	Right-handed alpha
Helix 15	AB6	B	253	291	Right-handed alpha
Helix 16	AB7	B	304	320	Right-handed alpha
Helix 17	AB8	C	7	12	Right-handed alpha
Helix 18	AB9	C	20	34	Right-handed alpha
Helix 19	AC1	C	43	52	Right-handed alpha
Helix 20	AC2	C	54	68	Right-handed alpha
Helix 21	AC3	C	71	132	Right-handed alpha
Helix 22	AC4	C	132	241	Right-handed alpha
Helix 23	AC5	C	253	291	Right-handed alpha
Helix 24	AC6	C	304	319	Right-handed alpha
Helix 25	AC7	D	7	12	Right-handed alpha
Helix 26	AC8	D	20	35	Right-handed alpha
Helix 27	AC9	D	54	68	Right-handed alpha
Helix 28	AD1	D	70	124	Right-handed alpha
Helix 29	AD2	D	125	131	Right-handed alpha
Helix 30	AD3	D	131	241	Right-handed alpha
Helix 31	AD4	D	253	291	Right-handed alpha
Helix 32	AD5	D	304	319	Right-handed alpha
Helix 33	AD6	E	7	12	Right-handed alpha
Helix 34	AD7	E	20	34	Right-handed alpha
Helix 35	AD8	E	35	37	Right-handed 310
Helix 36	AD9	E	43	52	Right-handed alpha
Helix 37	AE1	E	54	68	Right-handed alpha
Helix 38	AE2	E	70	124	Right-handed alpha
Helix 39	AE3	E	124	240	Right-handed alpha
Helix 40	AE4	E	253	291	Right-handed alpha
Helix 41	AE5	E	304	320	Right-handed alpha
Helix 42	AE6	F	7	12	Right-handed alpha
Helix 43	AE7	F	20	28	Right-handed alpha
Helix 44	AE8	F	28	34	Right-handed alpha
Helix 45	AE9	F	35	38	Right-handed 310
Helix 46	AF1	F	43	54	Right-handed alpha
Helix 47	AF2	F	54	68	Right-handed alpha
Helix 48	AF3	F	70	155	Right-handed alpha
Helix 49	AF4	F	156	241	Right-handed alpha
Helix 50	AF5	F	253	291	Right-handed alpha
Helix 51	AF6	F	304	319	Right-handed alpha
Helix 52	AF7	G	7	12	Right-handed alpha
Helix 53	AF8	G	20	34	Right-handed alpha
Helix 54	AF9	G	35	37	Right-handed 310
Helix 55	AG1	G	43	54	Right-handed alpha
Helix 56	AG2	G	54	68	Right-handed alpha
Helix 57	AG3	G	71	241	Right-handed alpha
Helix 58	AG4	G	253	291	Right-handed alpha
Helix 59	AG5	G	304	319	Right-handed alpha
Helix 60	AG6	H	7	12	Right-handed alpha
Helix 61	AG7	H	20	34	Right-handed alpha
Helix 62	AG8	H	35	38	Right-handed 310
Helix 63	AG9	H	43	54	Right-handed alpha
Helix 64	AH1	H	54	68	Right-handed alpha
Helix 65	AH2	H	70	131	Right-handed alpha
Helix 66	AH3	H	132	239	Right-handed alpha
Helix 67	AH4	H	253	291	Right-handed alpha
Helix 68	AH5	H	304	319	Right-handed alpha
Helix 69	AH6	I	7	12	Right-handed alpha
Helix 70	AH7	I	20	35	Right-handed alpha
Helix 71	AH8	I	43	54	Right-handed alpha
Helix 72	AH9	I	54	69	Right-handed alpha
Helix 73	AI1	I	71	124	Right-handed alpha
Helix 74	AI2	I	124	239	Right-handed alpha
Helix 75	AI3	I	253	291	Right-handed alpha
Helix 76	AI4	I	304	319	Right-handed alpha
Helix 77	AI5	J	7	12	Right-handed alpha
Helix 78	AI6	J	20	36	Right-handed alpha
Helix 79	AI7	J	43	54	Right-handed alpha
Helix 80	AI8	J	54	69	Right-handed alpha
Helix 81	AI9	J	72	241	Right-handed alpha
Helix 82	AJ1	J	253	291	Right-handed alpha
Helix 83	AJ2	J	304	319	Right-handed alpha
Helix 84	AJ3	K	7	12	Right-handed alpha
Helix 85	AJ4	K	20	34	Right-handed alpha
Helix 86	AJ5	K	43	50	Right-handed alpha
Helix 87	AJ6	K	54	69	Right-handed alpha
Helix 88	AJ7	K	71	240	Right-handed alpha
Helix 89	AJ8	K	253	291	Right-handed alpha
Helix 90	AJ9	K	304	319	Right-handed alpha
Helix 91	AK1	L	7	12	Right-handed alpha
Helix 92	AK2	L	20	34	Right-handed alpha
Helix 93	AK3	L	35	38	Right-handed 310
Helix 94	AK4	L	43	54	Right-handed alpha
Helix 95	AK5	L	54	69	Right-handed alpha
Helix 96	AK6	L	71	129	Right-handed alpha
Helix 97	AK7	L	131	241	Right-handed alpha
Helix 98	AK8	L	253	291	Right-handed alpha
Helix 99	AK9	L	304	319	Right-handed alpha
Helix 100	AL1	M	27	40	Right-handed alpha
Helix 101	AL2	M	42	53	Right-handed alpha
Helix 102	AL3	M	54	70	Right-handed alpha
Helix 103	AL4	M	83	99	Right-handed alpha
Helix 104	AL5	M	112	126	Right-handed alpha
Helix 105	AL6	M	134	142	Right-handed alpha
Helix 106	AL7	M	155	166	Right-handed alpha
Helix 107	AL8	M	194	198	Right-handed 310
Helix 108	AL9	M	268	274	Right-handed alpha
Helix 109	AM1	M	303	317	Right-handed alpha
Helix 110	AM2	M	319	329	Right-handed alpha
Helix 111	AM3	M	332	336	Right-handed 310
Helix 112	AM4	M	351	368	Right-handed alpha
Helix 113	AM5	M	371	376	Right-handed alpha
Helix 114	AM6	M	378	383	Right-handed alpha
Helix 115	AM7	M	491	496	Right-handed alpha
Helix 116	AM8	M	499	510	Right-handed alpha
Helix 117	AM9	N	50	52	Right-handed 310
Helix 118	AN1	N	66	70	Right-handed 310
Helix 119	AN2	N	123	130	Right-handed 310
Helix 120	AN3	N	139	224	Right-handed alpha
Helix 121	AN4	O	50	52	Right-handed 310
Helix 122	AN5	O	66	70	Right-handed 310
Helix 123	AN6	O	123	131	Right-handed alpha
Helix 124	AN7	O	135	139	Right-handed 310
Helix 125	AN8	O	140	224	Right-handed alpha
Helix 126	AN9	P	50	54	Right-handed 310
Helix 127	AO1	P	122	129	Right-handed alpha
Helix 128	AO2	P	140	224	Right-handed alpha

There are 12 sheets in PDB entry 9ZE4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	16	18	first strand
Strand 2	M	511	516	anti-parallel
Strand 3	M	338	345	anti-parallel
Strand 4	M	289	293	anti-parallel
Strand 5	M	296	297	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	16	18	first strand
Strand 2	M	511	516	anti-parallel
Strand 3	M	338	345	anti-parallel
Strand 4	M	488	489	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	77	82	first strand
Strand 2	M	392	397	anti-parallel
Strand 3	M	402	407	anti-parallel
Strand 4	M	466	470	anti-parallel
Strand 5	M	477	479	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	101	110	first strand
Strand 2	M	243	251	anti-parallel
Strand 3	M	256	262	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	204	205	first strand
Strand 2	M	146	154	parallel
Strand 3	M	213	221	anti-parallel
Strand 4	M	227	235	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	409	416	first strand
Strand 2	M	456	463	anti-parallel
Strand 3	M	439	453	anti-parallel
Strand 4	M	425	436	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	31	36	first strand
Strand 2	N	39	44	anti-parallel
Strand 3	N	80	84	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	71	75	first strand
Strand 2	N	54	62	anti-parallel
Strand 3	N	95	103	anti-parallel
Strand 4	N	115	117	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	32	36	first strand
Strand 2	O	39	43	anti-parallel
Strand 3	O	80	83	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	71	75	first strand
Strand 2	O	54	62	anti-parallel
Strand 3	O	94	103	anti-parallel
Strand 4	O	115	118	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	32	36	first strand
Strand 2	P	39	43	anti-parallel
Strand 3	P	80	83	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	71	76	first strand
Strand 2	P	56	62	anti-parallel
Strand 3	P	94	102	anti-parallel
Strand 4	P	115	118	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZE4

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZE4