Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZF0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZF0 entry

There are 4 chains in PDB entry 9ZF0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 41	LYS 1104
B	LEU 41	LYS 1104
C	LEU 41	LYS 1104
D	LEU 41	LYS 1104

There are192 helices in PDB entry 9ZF0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	73	78	Right-handed alpha
Helix 2	AA2	A	125	135	Right-handed alpha
Helix 3	AA3	A	158	175	Right-handed alpha
Helix 4	AA4	A	186	203	Right-handed alpha
Helix 5	AA5	A	222	227	Right-handed 310
Helix 6	AA6	A	274	279	Right-handed alpha
Helix 7	AA7	A	281	287	Right-handed alpha
Helix 8	AA8	A	310	322	Right-handed alpha
Helix 9	AA9	A	334	343	Right-handed alpha
Helix 10	AB1	A	350	362	Right-handed alpha
Helix 11	AB2	A	362	368	Right-handed alpha
Helix 12	AB3	A	370	387	Right-handed alpha
Helix 13	AB4	A	403	419	Right-handed alpha
Helix 14	AB5	A	420	423	Right-handed 310
Helix 15	AB6	A	425	436	Right-handed alpha
Helix 16	AB7	A	438	446	Right-handed alpha
Helix 17	AB8	A	459	468	Right-handed alpha
Helix 18	AB9	A	470	480	Right-handed alpha
Helix 19	AC1	A	483	488	Right-handed alpha
Helix 20	AC2	A	489	500	Right-handed alpha
Helix 21	AC3	A	502	516	Right-handed alpha
Helix 22	AC4	A	519	532	Right-handed alpha
Helix 23	AC5	A	559	571	Right-handed alpha
Helix 24	AC6	A	575	582	Right-handed alpha
Helix 25	AC7	A	586	602	Right-handed alpha
Helix 26	AC8	A	608	636	Right-handed alpha
Helix 27	AC9	A	637	644	Right-handed alpha
Helix 28	AD1	A	655	662	Right-handed alpha
Helix 29	AD2	A	671	684	Right-handed alpha
Helix 30	AD3	A	691	701	Right-handed alpha
Helix 31	AD4	A	703	708	Right-handed alpha
Helix 32	AD5	A	726	731	Right-handed alpha
Helix 33	AD6	A	733	758	Right-handed alpha
Helix 34	AD7	A	765	788	Right-handed alpha
Helix 35	AD8	A	798	818	Right-handed alpha
Helix 36	AD9	A	819	822	Right-handed 310
Helix 37	AE1	A	823	841	Right-handed alpha
Helix 38	AE2	A	841	849	Right-handed alpha
Helix 39	AE3	A	853	860	Right-handed alpha
Helix 40	AE4	A	867	890	Right-handed alpha
Helix 41	AE5	A	896	898	Right-handed 310
Helix 42	AE6	A	899	910	Right-handed alpha
Helix 43	AE7	A	911	913	Right-handed 310
Helix 44	AE8	A	953	982	Right-handed alpha
Helix 45	AE9	A	989	1008	Right-handed alpha
Helix 46	AF1	A	1012	1021	Right-handed alpha
Helix 47	AF2	A	1050	1071	Right-handed alpha
Helix 48	AF3	A	1078	1104	Right-handed alpha
Helix 49	AF4	B	73	78	Right-handed alpha
Helix 50	AF5	B	125	135	Right-handed alpha
Helix 51	AF6	B	158	175	Right-handed alpha
Helix 52	AF7	B	186	203	Right-handed alpha
Helix 53	AF8	B	222	227	Right-handed 310
Helix 54	AF9	B	274	279	Right-handed alpha
Helix 55	AG1	B	281	287	Right-handed alpha
Helix 56	AG2	B	310	322	Right-handed alpha
Helix 57	AG3	B	334	343	Right-handed alpha
Helix 58	AG4	B	350	362	Right-handed alpha
Helix 59	AG5	B	362	368	Right-handed alpha
Helix 60	AG6	B	370	387	Right-handed alpha
Helix 61	AG7	B	403	419	Right-handed alpha
Helix 62	AG8	B	420	423	Right-handed 310
Helix 63	AG9	B	425	436	Right-handed alpha
Helix 64	AH1	B	438	446	Right-handed alpha
Helix 65	AH2	B	459	468	Right-handed alpha
Helix 66	AH3	B	470	480	Right-handed alpha
Helix 67	AH4	B	483	488	Right-handed alpha
Helix 68	AH5	B	489	500	Right-handed alpha
Helix 69	AH6	B	502	516	Right-handed alpha
Helix 70	AH7	B	519	532	Right-handed alpha
Helix 71	AH8	B	559	571	Right-handed alpha
Helix 72	AH9	B	575	582	Right-handed alpha
Helix 73	AI1	B	586	602	Right-handed alpha
Helix 74	AI2	B	608	636	Right-handed alpha
Helix 75	AI3	B	637	644	Right-handed alpha
Helix 76	AI4	B	655	662	Right-handed alpha
Helix 77	AI5	B	671	684	Right-handed alpha
Helix 78	AI6	B	691	701	Right-handed alpha
Helix 79	AI7	B	703	708	Right-handed alpha
Helix 80	AI8	B	726	731	Right-handed alpha
Helix 81	AI9	B	733	758	Right-handed alpha
Helix 82	AJ1	B	765	788	Right-handed alpha
Helix 83	AJ2	B	798	818	Right-handed alpha
Helix 84	AJ3	B	819	822	Right-handed 310
Helix 85	AJ4	B	823	841	Right-handed alpha
Helix 86	AJ5	B	841	849	Right-handed alpha
Helix 87	AJ6	B	853	860	Right-handed alpha
Helix 88	AJ7	B	867	890	Right-handed alpha
Helix 89	AJ8	B	896	898	Right-handed 310
Helix 90	AJ9	B	899	910	Right-handed alpha
Helix 91	AK1	B	911	913	Right-handed 310
Helix 92	AK2	B	953	982	Right-handed alpha
Helix 93	AK3	B	989	1008	Right-handed alpha
Helix 94	AK4	B	1012	1021	Right-handed alpha
Helix 95	AK5	B	1050	1071	Right-handed alpha
Helix 96	AK6	B	1078	1104	Right-handed alpha
Helix 97	AK7	C	73	78	Right-handed alpha
Helix 98	AK8	C	125	135	Right-handed alpha
Helix 99	AK9	C	158	175	Right-handed alpha
Helix 100	AL1	C	186	203	Right-handed alpha
Helix 101	AL2	C	222	227	Right-handed 310
Helix 102	AL3	C	274	279	Right-handed alpha
Helix 103	AL4	C	281	287	Right-handed alpha
Helix 104	AL5	C	310	322	Right-handed alpha
Helix 105	AL6	C	334	343	Right-handed alpha
Helix 106	AL7	C	350	362	Right-handed alpha
Helix 107	AL8	C	362	368	Right-handed alpha
Helix 108	AL9	C	370	387	Right-handed alpha
Helix 109	AM1	C	403	419	Right-handed alpha
Helix 110	AM2	C	420	423	Right-handed 310
Helix 111	AM3	C	425	436	Right-handed alpha
Helix 112	AM4	C	438	446	Right-handed alpha
Helix 113	AM5	C	459	468	Right-handed alpha
Helix 114	AM6	C	470	480	Right-handed alpha
Helix 115	AM7	C	483	488	Right-handed alpha
Helix 116	AM8	C	489	500	Right-handed alpha
Helix 117	AM9	C	502	516	Right-handed alpha
Helix 118	AN1	C	519	532	Right-handed alpha
Helix 119	AN2	C	559	571	Right-handed alpha
Helix 120	AN3	C	575	582	Right-handed alpha
Helix 121	AN4	C	586	602	Right-handed alpha
Helix 122	AN5	C	608	636	Right-handed alpha
Helix 123	AN6	C	637	644	Right-handed alpha
Helix 124	AN7	C	655	662	Right-handed alpha
Helix 125	AN8	C	671	684	Right-handed alpha
Helix 126	AN9	C	691	701	Right-handed alpha
Helix 127	AO1	C	703	708	Right-handed alpha
Helix 128	AO2	C	726	731	Right-handed alpha
Helix 129	AO3	C	733	758	Right-handed alpha
Helix 130	AO4	C	765	788	Right-handed alpha
Helix 131	AO5	C	798	818	Right-handed alpha
Helix 132	AO6	C	819	822	Right-handed 310
Helix 133	AO7	C	823	841	Right-handed alpha
Helix 134	AO8	C	841	849	Right-handed alpha
Helix 135	AO9	C	853	860	Right-handed alpha
Helix 136	AP1	C	867	890	Right-handed alpha
Helix 137	AP2	C	896	898	Right-handed 310
Helix 138	AP3	C	899	910	Right-handed alpha
Helix 139	AP4	C	911	913	Right-handed 310
Helix 140	AP5	C	953	982	Right-handed alpha
Helix 141	AP6	C	989	1008	Right-handed alpha
Helix 142	AP7	C	1012	1021	Right-handed alpha
Helix 143	AP8	C	1050	1071	Right-handed alpha
Helix 144	AP9	C	1078	1104	Right-handed alpha
Helix 145	AQ1	D	73	78	Right-handed alpha
Helix 146	AQ2	D	125	135	Right-handed alpha
Helix 147	AQ3	D	158	175	Right-handed alpha
Helix 148	AQ4	D	186	203	Right-handed alpha
Helix 149	AQ5	D	222	227	Right-handed 310
Helix 150	AQ6	D	274	279	Right-handed alpha
Helix 151	AQ7	D	281	287	Right-handed alpha
Helix 152	AQ8	D	310	322	Right-handed alpha
Helix 153	AQ9	D	334	343	Right-handed alpha
Helix 154	AR1	D	350	362	Right-handed alpha
Helix 155	AR2	D	362	368	Right-handed alpha
Helix 156	AR3	D	370	387	Right-handed alpha
Helix 157	AR4	D	403	419	Right-handed alpha
Helix 158	AR5	D	420	423	Right-handed 310
Helix 159	AR6	D	425	436	Right-handed alpha
Helix 160	AR7	D	438	446	Right-handed alpha
Helix 161	AR8	D	459	468	Right-handed alpha
Helix 162	AR9	D	470	480	Right-handed alpha
Helix 163	AS1	D	483	488	Right-handed alpha
Helix 164	AS2	D	489	500	Right-handed alpha
Helix 165	AS3	D	502	516	Right-handed alpha
Helix 166	AS4	D	519	532	Right-handed alpha
Helix 167	AS5	D	559	571	Right-handed alpha
Helix 168	AS6	D	575	582	Right-handed alpha
Helix 169	AS7	D	586	602	Right-handed alpha
Helix 170	AS8	D	608	636	Right-handed alpha
Helix 171	AS9	D	637	644	Right-handed alpha
Helix 172	AT1	D	655	662	Right-handed alpha
Helix 173	AT2	D	671	684	Right-handed alpha
Helix 174	AT3	D	691	701	Right-handed alpha
Helix 175	AT4	D	703	708	Right-handed alpha
Helix 176	AT5	D	726	731	Right-handed alpha
Helix 177	AT6	D	733	758	Right-handed alpha
Helix 178	AT7	D	765	788	Right-handed alpha
Helix 179	AT8	D	798	818	Right-handed alpha
Helix 180	AT9	D	819	822	Right-handed 310
Helix 181	AU1	D	823	841	Right-handed alpha
Helix 182	AU2	D	841	849	Right-handed alpha
Helix 183	AU3	D	853	860	Right-handed alpha
Helix 184	AU4	D	867	890	Right-handed alpha
Helix 185	AU5	D	896	898	Right-handed 310
Helix 186	AU6	D	899	910	Right-handed alpha
Helix 187	AU7	D	911	913	Right-handed 310
Helix 188	AU8	D	953	982	Right-handed alpha
Helix 189	AU9	D	989	1008	Right-handed alpha
Helix 190	AV1	D	1012	1021	Right-handed alpha
Helix 191	AV2	D	1050	1071	Right-handed alpha
Helix 192	AV3	D	1078	1104	Right-handed alpha

There are 8 sheets in PDB entry 9ZF0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	107	first strand
Strand 2	A	114	118	anti-parallel
Strand 3	A	259	263	parallel
Strand 4	A	213	216	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	146	first strand
Strand 2	A	301	305	parallel
Strand 3	A	326	330	parallel
Strand 4	A	393	395	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	107	first strand
Strand 2	B	114	118	anti-parallel
Strand 3	B	259	263	parallel
Strand 4	B	213	216	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	146	first strand
Strand 2	B	301	305	parallel
Strand 3	B	326	330	parallel
Strand 4	B	393	395	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	106	107	first strand
Strand 2	C	114	118	anti-parallel
Strand 3	C	259	263	parallel
Strand 4	C	213	216	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	146	first strand
Strand 2	C	301	305	parallel
Strand 3	C	326	330	parallel
Strand 4	C	393	395	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	106	107	first strand
Strand 2	D	114	118	anti-parallel
Strand 3	D	259	263	parallel
Strand 4	D	213	216	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	146	first strand
Strand 2	D	301	305	parallel
Strand 3	D	326	330	parallel
Strand 4	D	393	395	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZF0

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZF0