Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZG5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZG5 entry

There are 12 chains in PDB entry 9ZG5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 6	LEU 66
A	VAL 70	TYR 239
C	GLY 1	SER 130
B	LYS 5	LEU 66
B	VAL 70	TYR 239
D	GLY 1	SER 130
E	LYS 5	LEU 66
E	VAL 70	TYR 239
F	GLY 1	SER 130
G	LYS 5	LEU 66
G	VAL 70	TYR 239
H	GLY 1	SER 130

There are 41 helices in PDB entry 9ZG5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	11	Right-handed 310
Helix 2	AA2	A	58	63	Right-handed 310
Helix 3	AA3	A	70	74	Right-handed 310
Helix 4	AA4	A	77	83	Right-handed 310
Helix 5	AA5	A	84	89	Right-handed alpha
Helix 6	AA6	A	235	239	Right-handed 310
Helix 7	AA7	C	30	33	Right-handed 310
Helix 8	AA8	C	89	93	Right-handed 310
Helix 9	AA9	C	107	112	Right-handed 310
Helix 10	AB1	C	113	117	Right-handed 310
Helix 11	AB2	B	6	11	Right-handed 310
Helix 12	AB3	B	58	63	Right-handed 310
Helix 13	AB4	B	70	74	Right-handed 310
Helix 14	AB5	B	77	83	Right-handed 310
Helix 15	AB6	B	84	89	Right-handed alpha
Helix 16	AB7	B	158	161	Right-handed 310
Helix 17	AB8	B	235	239	Right-handed 310
Helix 18	AB9	D	30	33	Right-handed 310
Helix 19	AC1	D	89	93	Right-handed 310
Helix 20	AC2	D	107	112	Right-handed 310
Helix 21	AC3	D	113	117	Right-handed 310
Helix 22	AC4	E	6	11	Right-handed 310
Helix 23	AC5	E	59	63	Right-handed 310
Helix 24	AC6	E	70	74	Right-handed 310
Helix 25	AC7	E	77	83	Right-handed 310
Helix 26	AC8	E	84	89	Right-handed alpha
Helix 27	AC9	E	235	239	Right-handed 310
Helix 28	AD1	F	30	33	Right-handed 310
Helix 29	AD2	F	89	93	Right-handed 310
Helix 30	AD3	F	107	112	Right-handed 310
Helix 31	AD4	F	113	117	Right-handed 310
Helix 32	AD5	G	6	11	Right-handed 310
Helix 33	AD6	G	59	63	Right-handed 310
Helix 34	AD7	G	70	74	Right-handed 310
Helix 35	AD8	G	77	83	Right-handed 310
Helix 36	AD9	G	84	90	Right-handed alpha
Helix 37	AE1	G	235	239	Right-handed 310
Helix 38	AE2	H	30	33	Right-handed 310
Helix 39	AE3	H	89	93	Right-handed 310
Helix 40	AE4	H	107	112	Right-handed 310
Helix 41	AE5	H	113	117	Right-handed 310

There are 16 sheets in PDB entry 9ZG5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	24	first strand
Strand 2	A	27	38	anti-parallel
Strand 3	A	43	50	anti-parallel
Strand 4	A	219	229	anti-parallel
Strand 5	A	201	210	anti-parallel
Strand 6	A	150	156	anti-parallel
Strand 7	A	163	172	anti-parallel
Strand 8	A	178	189	anti-parallel
Strand 9	A	94	102	anti-parallel
Strand 10	A	107	117	anti-parallel
Strand 11	A	120	130	anti-parallel
Strand 12	A	13	24	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	9	first strand
Strand 2	C	20	28	anti-parallel
Strand 3	C	80	85	anti-parallel
Strand 4	C	70	74	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	15	first strand
Strand 2	C	124	129	parallel
Strand 3	C	94	101	anti-parallel
Strand 4	C	35	41	anti-parallel
Strand 5	C	47	54	anti-parallel
Strand 6	C	60	62	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	15	first strand
Strand 2	C	124	129	parallel
Strand 3	C	94	101	anti-parallel
Strand 4	C	119	120	anti-parallel

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There are 12 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	24	first strand
Strand 2	B	27	38	anti-parallel
Strand 3	B	43	50	anti-parallel
Strand 4	B	219	229	anti-parallel
Strand 5	B	201	210	anti-parallel
Strand 6	B	149	157	anti-parallel
Strand 7	B	162	172	anti-parallel
Strand 8	B	178	189	anti-parallel
Strand 9	B	94	102	anti-parallel
Strand 10	B	107	116	anti-parallel
Strand 11	B	121	130	anti-parallel
Strand 12	B	13	24	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	9	first strand
Strand 2	D	20	28	anti-parallel
Strand 3	D	80	85	anti-parallel
Strand 4	D	70	75	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	15	first strand
Strand 2	D	124	129	parallel
Strand 3	D	94	101	anti-parallel
Strand 4	D	35	41	anti-parallel
Strand 5	D	47	54	anti-parallel
Strand 6	D	60	62	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	15	first strand
Strand 2	D	124	129	parallel
Strand 3	D	94	101	anti-parallel
Strand 4	D	119	120	anti-parallel

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There are 12 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	13	24	first strand
Strand 2	E	27	38	anti-parallel
Strand 3	E	43	50	anti-parallel
Strand 4	E	219	229	anti-parallel
Strand 5	E	201	210	anti-parallel
Strand 6	E	150	156	anti-parallel
Strand 7	E	163	172	anti-parallel
Strand 8	E	178	189	anti-parallel
Strand 9	E	94	102	anti-parallel
Strand 10	E	107	116	anti-parallel
Strand 11	E	121	130	anti-parallel
Strand 12	E	13	24	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	9	first strand
Strand 2	F	20	28	anti-parallel
Strand 3	F	81	85	anti-parallel
Strand 4	F	70	74	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	13	15	first strand
Strand 2	F	124	129	parallel
Strand 3	F	94	101	anti-parallel
Strand 4	F	35	41	anti-parallel
Strand 5	F	48	54	anti-parallel
Strand 6	F	60	62	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	13	15	first strand
Strand 2	F	124	129	parallel
Strand 3	F	94	101	anti-parallel
Strand 4	F	119	120	anti-parallel

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There are 12 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	13	24	first strand
Strand 2	G	27	38	anti-parallel
Strand 3	G	43	50	anti-parallel
Strand 4	G	219	229	anti-parallel
Strand 5	G	201	210	anti-parallel
Strand 6	G	150	156	anti-parallel
Strand 7	G	163	172	anti-parallel
Strand 8	G	178	189	anti-parallel
Strand 9	G	94	102	anti-parallel
Strand 10	G	107	117	anti-parallel
Strand 11	G	120	130	anti-parallel
Strand 12	G	13	24	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	9	first strand
Strand 2	H	20	28	anti-parallel
Strand 3	H	80	85	anti-parallel
Strand 4	H	70	75	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	13	15	first strand
Strand 2	H	124	129	parallel
Strand 3	H	94	100	anti-parallel
Strand 4	H	35	41	anti-parallel
Strand 5	H	47	54	anti-parallel
Strand 6	H	60	62	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	13	15	first strand
Strand 2	H	124	129	parallel
Strand 3	H	94	100	anti-parallel
Strand 4	H	119	120	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZG5

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZG5