Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZGF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZGF entry

There are 4 chains in PDB entry 9ZGF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 8SER 1039
C
 GLY 20LEU 851
D
 C 1 T 39
E
 A 9 G 31
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 83 helices in PDB entry 9ZGF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 38Right-handed alpha
Helix 2
AA2
A
99 103Right-handed 310
Helix 3
AA3
A
111 124Right-handed alpha
Helix 4
AA4
A
133 138Right-handed 310
Helix 5
AA5
A
140 149Right-handed alpha
Helix 6
AA6
A
151 153Right-handed 310
Helix 7
AA7
A
178 181Right-handed 310
Helix 8
AA8
A
200 203Right-handed 310
Helix 9
AA9
A
233 252Right-handed alpha
Helix 10
AB1
A
256 270Right-handed alpha
Helix 11
AB2
A
309 332Right-handed alpha
Helix 12
AB3
A
341 349Right-handed 310
Helix 13
AB4
A
353 368Right-handed alpha
Helix 14
AB5
A
369 377Right-handed alpha
Helix 15
AB6
A
447 455Right-handed alpha
Helix 16
AB7
A
458 470Right-handed alpha
Helix 17
AB8
A
484 492Right-handed alpha
Helix 18
AB9
A
503 509Right-handed 310
Helix 19
AC1
A
510 518Right-handed alpha
Helix 20
AC2
A
519 522Right-handed 310
Helix 21
AC3
A
554 559Right-handed alpha
Helix 22
AC4
A
566 572Right-handed alpha
Helix 23
AC5
A
574 589Right-handed alpha
Helix 24
AC6
A
609 638Right-handed alpha
Helix 25
AC7
A
642 647Right-handed alpha
Helix 26
AC8
A
668 687Right-handed alpha
Helix 27
AC9
A
688 694Right-handed alpha
Helix 28
AD1
A
702 717Right-handed alpha
Helix 29
AD2
A
787 798Right-handed alpha
Helix 30
AD3
A
809 813Right-handed 310
Helix 31
AD4
A
815 827Right-handed alpha
Helix 32
AD5
A
839 849Right-handed alpha
Helix 33
AD6
A
858 879Right-handed alpha
Helix 34
AD7
A
887 904Right-handed alpha
Helix 35
AD8
A
927 934Right-handed 310
Helix 36
AD9
A
937 939Right-handed 310
Helix 37
AE1
A
940 951Right-handed alpha
Helix 38
AE2
A
952 955Right-handed 310
Helix 39
AE3
A
972 976Right-handed 310
Helix 40
AE4
A
1008 1012Right-handed 310
Helix 41
AE5
C
21 29Right-handed alpha
Helix 42
AE6
C
32 38Right-handed alpha
Helix 43
AE7
C
41 50Right-handed alpha
Helix 44
AE8
C
86 99Right-handed alpha
Helix 45
AE9
C
112 126Right-handed alpha
Helix 46
AF1
C
145 147Right-handed 310
Helix 47
AF2
C
155 160Right-handed 310
Helix 48
AF3
C
161 166Right-handed alpha
Helix 49
AF4
C
175 182Right-handed alpha
Helix 50
AF5
C
183 185Right-handed 310
Helix 51
AF6
C
190 205Right-handed alpha
Helix 52
AF7
C
216 228Right-handed alpha
Helix 53
AF8
C
256 264Right-handed alpha
Helix 54
AF9
C
285 297Right-handed alpha
Helix 55
AG1
C
306 319Right-handed alpha
Helix 56
AG2
C
335 342Right-handed 310
Helix 57
AG3
C
377 385Right-handed alpha
Helix 58
AG4
C
417 424Right-handed alpha
Helix 59
AG5
C
427 450Right-handed alpha
Helix 60
AG6
C
458 464Right-handed alpha
Helix 61
AG7
C
464 474Right-handed alpha
Helix 62
AG8
C
477 491Right-handed alpha
Helix 63
AG9
C
506 531Right-handed alpha
Helix 64
AH1
C
540 546Right-handed alpha
Helix 65
AH2
C
547 557Right-handed alpha
Helix 66
AH3
C
563 575Right-handed alpha
Helix 67
AH4
C
576 595Right-handed alpha
Helix 68
AH5
C
596 600Right-handed 310
Helix 69
AH6
C
601 614Right-handed alpha
Helix 70
AH7
C
637 653Right-handed alpha
Helix 71
AH8
C
668 677Right-handed alpha
Helix 72
AH9
C
679 692Right-handed alpha
Helix 73
AI1
C
697 703Right-handed alpha
Helix 74
AI2
C
703 715Right-handed alpha
Helix 75
AI3
C
723 739Right-handed alpha
Helix 76
AI4
C
761 771Right-handed alpha
Helix 77
AI5
C
775 779Right-handed 310
Helix 78
AI6
C
781 792Right-handed alpha
Helix 79
AI7
C
793 796Right-handed 310
Helix 80
AI8
C
806 812Right-handed 310
Helix 81
AI9
C
824 833Right-handed alpha
Helix 82
AJ1
C
834 839Right-handed 310
Helix 83
AJ2
C
847 851Right-handed 310
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There are 13 sheets in PDB entry 9ZGF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 13first strand
Strand 2
A
724 733parallel
Strand 3
A
764 776anti-parallel
Strand 4
A
651 657anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
65 72parallel
Strand 3
A
82 88anti-parallel
Strand 4
A
758 760parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
47 50anti-parallel
Strand 3
A
93 98anti-parallel
Strand 4
A
155 161anti-parallel
Strand 5
A
19 25anti-parallel
Strand 6
A
189 198anti-parallel
Strand 7
A
174 176anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
47 50anti-parallel
Strand 3
A
93 98anti-parallel
Strand 4
A
155 161anti-parallel
Strand 5
A
19 25anti-parallel
Strand 6
A
189 198anti-parallel
Strand 7
A
182 186anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
420 421anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 390first strand
Strand 2
A
407 411anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
533 538first strand
Strand 2
A
978 989anti-parallel
Strand 3
A
1022 1028anti-parallel
Strand 4
A
913 922parallel
Strand 5
A
960 966anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
533 538first strand
Strand 2
A
978 989anti-parallel
Strand 3
A
997 1004anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 58first strand
Strand 2
C
232 237parallel
Strand 3
C
76 80parallel
Strand 4
C
207 212parallel
Strand 5
C
170 174parallel
Strand 6
C
106 110parallel
Strand 7
C
149 153parallel
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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
324 327first strand
Strand 2
C
344 347parallel
Strand 3
C
300 304parallel
Strand 4
C
364 369parallel
Strand 5
C
395 400parallel
Strand 6
C
248 251parallel
Strand 7
C
495 498parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
616 620first strand
Strand 2
C
626 630anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
656 657first strand
Strand 2
C
662 663anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
743 746first strand
Strand 2
C
801 804anti-parallel
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