Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZGL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZGL entry

There are 3 chains in PDB entry 9ZGL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 13	LEU 557
B	ALA 13	LEU 557
C	ALA 13	GLY 271

There are120 helices in PDB entry 9ZGL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	27	Right-handed alpha
Helix 2	AA2	A	40	47	Right-handed alpha
Helix 3	AA3	A	59	75	Right-handed alpha
Helix 4	AA4	A	85	90	Right-handed alpha
Helix 5	AA5	A	91	101	Right-handed alpha
Helix 6	AA6	A	126	132	Right-handed alpha
Helix 7	AA7	A	133	135	Right-handed 310
Helix 8	AA8	A	143	145	Right-handed 310
Helix 9	AA9	A	146	160	Right-handed alpha
Helix 10	AB1	A	172	177	Right-handed alpha
Helix 11	AB2	A	196	210	Right-handed alpha
Helix 12	AB3	A	223	236	Right-handed alpha
Helix 13	AB4	A	245	248	Right-handed 310
Helix 14	AB5	A	255	257	Right-handed 310
Helix 15	AB6	A	269	278	Right-handed alpha
Helix 16	AB7	A	292	296	Right-handed 310
Helix 17	AB8	A	327	340	Right-handed alpha
Helix 18	AB9	A	345	361	Right-handed alpha
Helix 19	AC1	A	375	387	Right-handed alpha
Helix 20	AC2	A	398	408	Right-handed alpha
Helix 21	AC3	A	427	439	Right-handed alpha
Helix 22	AC4	A	450	457	Right-handed alpha
Helix 23	AC5	A	459	467	Right-handed alpha
Helix 24	AC6	A	480	492	Right-handed alpha
Helix 25	AC7	A	503	511	Right-handed alpha
Helix 26	AC8	A	520	522	Right-handed 310
Helix 27	AC9	A	523	534	Right-handed alpha
Helix 28	AD1	A	546	554	Right-handed 310
Helix 29	AD2	B	16	27	Right-handed alpha
Helix 30	AD3	B	40	50	Right-handed alpha
Helix 31	AD4	B	59	75	Right-handed alpha
Helix 32	AD5	B	85	90	Right-handed alpha
Helix 33	AD6	B	91	102	Right-handed alpha
Helix 34	AD7	B	113	117	Right-handed 310
Helix 35	AD8	B	126	132	Right-handed alpha
Helix 36	AD9	B	133	135	Right-handed 310
Helix 37	AE1	B	143	145	Right-handed 310
Helix 38	AE2	B	146	160	Right-handed alpha
Helix 39	AE3	B	172	177	Right-handed alpha
Helix 40	AE4	B	196	210	Right-handed alpha
Helix 41	AE5	B	223	236	Right-handed alpha
Helix 42	AE6	B	245	248	Right-handed 310
Helix 43	AE7	B	255	257	Right-handed 310
Helix 44	AE8	B	269	278	Right-handed alpha
Helix 45	AE9	B	287	291	Right-handed 310
Helix 46	AF1	B	292	297	Right-handed alpha
Helix 47	AF2	B	327	340	Right-handed alpha
Helix 48	AF3	B	345	363	Right-handed alpha
Helix 49	AF4	B	375	387	Right-handed alpha
Helix 50	AF5	B	398	408	Right-handed alpha
Helix 51	AF6	B	427	439	Right-handed alpha
Helix 52	AF7	B	450	457	Right-handed alpha
Helix 53	AF8	B	459	467	Right-handed alpha
Helix 54	AF9	B	480	492	Right-handed alpha
Helix 55	AG1	B	503	511	Right-handed alpha
Helix 56	AG2	B	523	534	Right-handed alpha
Helix 57	AG3	B	546	554	Right-handed 310
Helix 58	AG4	C	15	27	Right-handed alpha
Helix 59	AG5	C	37	39	Right-handed 310
Helix 60	AG6	C	40	50	Right-handed alpha
Helix 61	AG7	C	59	75	Right-handed alpha
Helix 62	AG8	C	85	90	Right-handed alpha
Helix 63	AG9	C	91	102	Right-handed alpha
Helix 64	AH1	C	113	117	Right-handed 310
Helix 65	AH2	C	126	132	Right-handed alpha
Helix 66	AH3	C	133	135	Right-handed 310
Helix 67	AH4	C	143	145	Right-handed 310
Helix 68	AH5	C	146	159	Right-handed alpha
Helix 69	AH6	C	172	177	Right-handed alpha
Helix 70	AH7	C	196	210	Right-handed alpha
Helix 71	AH8	C	219	222	Right-handed 310
Helix 72	AH9	C	223	236	Right-handed alpha
Helix 73	AI1	C	245	248	Right-handed 310
Helix 74	AI2	C	255	257	Right-handed 310
Helix 75	AI3	C	269	278	Right-handed alpha
Helix 76	AI4	C	287	291	Right-handed 310
Helix 77	AI5	C	292	297	Right-handed alpha
Helix 78	AI6	C	327	340	Right-handed alpha
Helix 79	AI7	C	345	362	Right-handed alpha
Helix 80	AI8	C	375	385	Right-handed alpha
Helix 81	AI9	C	398	408	Right-handed alpha
Helix 82	AJ1	C	427	439	Right-handed alpha
Helix 83	AJ2	C	450	457	Right-handed alpha
Helix 84	AJ3	C	459	466	Right-handed alpha
Helix 85	AJ4	C	480	492	Right-handed alpha
Helix 86	AJ5	C	503	511	Right-handed alpha
Helix 87	AJ6	C	520	522	Right-handed 310
Helix 88	AJ7	C	523	534	Right-handed alpha
Helix 89	AJ8	C	548	554	Right-handed 310
Helix 90	AJ9	D	15	27	Right-handed alpha
Helix 91	AK1	D	40	50	Right-handed alpha
Helix 92	AK2	D	59	75	Right-handed alpha
Helix 93	AK3	D	85	90	Right-handed alpha
Helix 94	AK4	D	91	101	Right-handed alpha
Helix 95	AK5	D	113	117	Right-handed 310
Helix 96	AK6	D	126	132	Right-handed alpha
Helix 97	AK7	D	133	135	Right-handed 310
Helix 98	AK8	D	143	145	Right-handed 310
Helix 99	AK9	D	146	160	Right-handed alpha
Helix 100	AL1	D	172	177	Right-handed alpha
Helix 101	AL2	D	196	210	Right-handed alpha
Helix 102	AL3	D	219	222	Right-handed 310
Helix 103	AL4	D	223	236	Right-handed alpha
Helix 104	AL5	D	246	248	Right-handed 310
Helix 105	AL6	D	255	257	Right-handed 310
Helix 106	AL7	D	269	278	Right-handed alpha
Helix 107	AL8	D	287	291	Right-handed 310
Helix 108	AL9	D	292	297	Right-handed alpha
Helix 109	AM1	D	327	340	Right-handed alpha
Helix 110	AM2	D	345	363	Right-handed alpha
Helix 111	AM3	D	375	385	Right-handed alpha
Helix 112	AM4	D	398	408	Right-handed alpha
Helix 113	AM5	D	427	439	Right-handed alpha
Helix 114	AM6	D	450	457	Right-handed alpha
Helix 115	AM7	D	459	467	Right-handed alpha
Helix 116	AM8	D	480	492	Right-handed alpha
Helix 117	AM9	D	503	511	Right-handed alpha
Helix 118	AN1	D	520	522	Right-handed 310
Helix 119	AN2	D	523	534	Right-handed alpha
Helix 120	AN3	D	546	554	Right-handed 310

There are 13 sheets in PDB entry 9ZGL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	56	first strand
Strand 2	A	31	34	parallel
Strand 3	A	78	82	parallel
Strand 4	A	105	111	parallel
Strand 5	A	165	171	parallel
Strand 6	A	137	140	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	262	first strand
Strand 2	A	241	243	parallel
Strand 3	A	213	217	parallel
Strand 4	A	280	284	parallel
Strand 5	A	303	308	parallel
Strand 6	A	322	325	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	416	417	first strand
Strand 2	A	392	395	parallel
Strand 3	A	444	449	parallel
Strand 4	A	470	476	parallel
Strand 5	A	538	543	parallel
Strand 6	A	514	517	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	15	first strand
Strand 2	B	178	179	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	56	first strand
Strand 2	B	31	34	parallel
Strand 3	B	78	82	parallel
Strand 4	B	105	111	parallel
Strand 5	B	165	171	parallel
Strand 6	B	137	140	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	262	first strand
Strand 2	B	241	243	parallel
Strand 3	B	213	217	parallel
Strand 4	B	280	284	parallel
Strand 5	B	303	308	parallel
Strand 6	B	322	325	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	416	418	first strand
Strand 2	B	392	395	parallel
Strand 3	B	444	449	parallel
Strand 4	B	470	476	parallel
Strand 5	B	538	543	parallel
Strand 6	B	514	517	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	56	first strand
Strand 2	C	31	34	parallel
Strand 3	C	78	82	parallel
Strand 4	C	105	111	parallel
Strand 5	C	165	171	parallel
Strand 6	C	137	140	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	259	262	first strand
Strand 2	C	241	243	parallel
Strand 3	C	213	217	parallel
Strand 4	C	280	284	parallel
Strand 5	C	303	308	parallel
Strand 6	C	322	325	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	416	417	first strand
Strand 2	C	392	395	parallel
Strand 3	C	444	449	parallel
Strand 4	C	470	476	parallel
Strand 5	C	538	543	parallel
Strand 6	C	514	517	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	56	first strand
Strand 2	D	31	34	parallel
Strand 3	D	78	82	parallel
Strand 4	D	105	111	parallel
Strand 5	D	165	171	parallel
Strand 6	D	137	140	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	259	263	first strand
Strand 2	D	241	244	parallel
Strand 3	D	213	217	parallel
Strand 4	D	280	284	parallel
Strand 5	D	303	308	parallel
Strand 6	D	322	325	parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	416	417	first strand
Strand 2	D	392	395	parallel
Strand 3	D	444	449	parallel
Strand 4	D	470	476	parallel
Strand 5	D	538	543	parallel
Strand 6	D	514	517	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZGL

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZGL