Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZHH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZHH entry

There are 12 chains in PDB entry 9ZHH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 157	VAL 266
G	GLU 157	VAL 266
B	GLU 157	VAL 266
H	GLU 157	VAL 266
C	GLU 157	VAL 266
I	GLU 157	VAL 266
D	GLU 157	VAL 266
J	GLU 157	VAL 266
E	GLU 157	VAL 266
K	GLU 157	VAL 266
F	GLU 157	VAL 266
L	GLU 157	VAL 266

There are 20 helices in PDB entry 9ZHH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	209	213	Right-handed 310
Helix 2	AA2	A	239	243	Right-handed 310
Helix 3	AA3	G	209	213	Right-handed 310
Helix 4	AA4	G	239	243	Right-handed 310
Helix 5	AA5	B	239	243	Right-handed 310
Helix 6	AA6	H	209	213	Right-handed 310
Helix 7	AA7	H	239	243	Right-handed 310
Helix 8	AA8	C	209	213	Right-handed 310
Helix 9	AA9	C	239	243	Right-handed 310
Helix 10	AB1	I	209	213	Right-handed 310
Helix 11	AB2	I	239	243	Right-handed 310
Helix 12	AB3	D	239	243	Right-handed 310
Helix 13	AB4	J	209	213	Right-handed 310
Helix 14	AB5	J	239	243	Right-handed 310
Helix 15	AB6	E	239	243	Right-handed 310
Helix 16	AB7	K	209	213	Right-handed 310
Helix 17	AB8	K	239	243	Right-handed 310
Helix 18	AB9	F	239	243	Right-handed 310
Helix 19	AC1	L	209	213	Right-handed 310
Helix 20	AC2	L	239	243	Right-handed 310

There are 24 sheets in PDB entry 9ZHH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	164	first strand
Strand 2	A	182	184	anti-parallel
Strand 3	A	228	235	anti-parallel
Strand 4	A	216	221	anti-parallel
Strand 5	L	216	221	anti-parallel
Strand 6	L	228	235	anti-parallel
Strand 7	L	182	186	anti-parallel
Strand 8	L	158	164	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	180	first strand
Strand 2	A	228	235	anti-parallel
Strand 3	A	216	221	anti-parallel
Strand 4	L	216	221	anti-parallel
Strand 5	L	228	235	anti-parallel
Strand 6	L	177	180	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	172	first strand
Strand 2	A	255	266	parallel
Strand 3	A	244	252	anti-parallel
Strand 4	A	190	199	anti-parallel
Strand 5	A	202	207	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	158	164	first strand
Strand 2	G	182	186	anti-parallel
Strand 3	G	228	235	anti-parallel
Strand 4	G	216	221	anti-parallel
Strand 5	B	216	221	anti-parallel
Strand 6	B	228	235	anti-parallel
Strand 7	B	182	184	anti-parallel
Strand 8	B	161	164	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	177	180	first strand
Strand 2	G	228	235	anti-parallel
Strand 3	G	216	221	anti-parallel
Strand 4	B	216	221	anti-parallel
Strand 5	B	228	235	anti-parallel
Strand 6	B	177	180	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	169	172	first strand
Strand 2	G	255	266	parallel
Strand 3	G	244	252	anti-parallel
Strand 4	G	190	199	anti-parallel
Strand 5	G	202	207	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	172	first strand
Strand 2	B	255	266	parallel
Strand 3	B	244	252	anti-parallel
Strand 4	B	190	199	anti-parallel
Strand 5	B	202	207	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	158	164	first strand
Strand 2	H	182	186	anti-parallel
Strand 3	H	228	235	anti-parallel
Strand 4	H	216	221	anti-parallel
Strand 5	C	216	221	anti-parallel
Strand 6	C	228	235	anti-parallel
Strand 7	C	182	184	anti-parallel
Strand 8	C	161	164	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	177	180	first strand
Strand 2	H	228	235	anti-parallel
Strand 3	H	216	221	anti-parallel
Strand 4	C	216	221	anti-parallel
Strand 5	C	228	235	anti-parallel
Strand 6	C	177	180	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	169	172	first strand
Strand 2	H	255	266	parallel
Strand 3	H	244	252	anti-parallel
Strand 4	H	190	199	anti-parallel
Strand 5	H	202	207	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	172	first strand
Strand 2	C	255	266	parallel
Strand 3	C	244	252	anti-parallel
Strand 4	C	190	199	anti-parallel
Strand 5	C	202	207	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	158	164	first strand
Strand 2	I	182	186	anti-parallel
Strand 3	I	228	235	anti-parallel
Strand 4	I	177	180	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	158	164	first strand
Strand 2	I	182	186	anti-parallel
Strand 3	I	228	235	anti-parallel
Strand 4	I	216	221	anti-parallel
Strand 5	D	216	221	anti-parallel
Strand 6	D	228	235	anti-parallel
Strand 7	D	177	184	anti-parallel
Strand 8	D	161	164	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	169	172	first strand
Strand 2	I	255	266	parallel
Strand 3	I	244	252	anti-parallel
Strand 4	I	190	199	anti-parallel
Strand 5	I	202	207	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	172	first strand
Strand 2	D	255	266	parallel
Strand 3	D	244	252	anti-parallel
Strand 4	D	190	199	anti-parallel
Strand 5	D	202	207	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	158	164	first strand
Strand 2	J	182	186	anti-parallel
Strand 3	J	228	235	anti-parallel
Strand 4	J	216	221	anti-parallel
Strand 5	E	216	221	anti-parallel
Strand 6	E	228	235	anti-parallel
Strand 7	E	182	184	anti-parallel
Strand 8	E	161	164	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	177	180	first strand
Strand 2	J	228	235	anti-parallel
Strand 3	J	216	221	anti-parallel
Strand 4	E	216	221	anti-parallel
Strand 5	E	228	235	anti-parallel
Strand 6	E	177	180	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	169	172	first strand
Strand 2	J	255	266	parallel
Strand 3	J	244	252	anti-parallel
Strand 4	J	192	199	anti-parallel
Strand 5	J	202	207	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	169	172	first strand
Strand 2	E	255	266	parallel
Strand 3	E	244	252	anti-parallel
Strand 4	E	190	199	anti-parallel
Strand 5	E	202	207	anti-parallel

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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	158	164	first strand
Strand 2	K	182	186	anti-parallel
Strand 3	K	228	235	anti-parallel
Strand 4	K	216	221	anti-parallel
Strand 5	F	216	221	anti-parallel
Strand 6	F	228	235	anti-parallel
Strand 7	F	182	184	anti-parallel
Strand 8	F	161	164	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	177	180	first strand
Strand 2	K	228	235	anti-parallel
Strand 3	K	216	221	anti-parallel
Strand 4	F	216	221	anti-parallel
Strand 5	F	228	235	anti-parallel
Strand 6	F	177	180	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	169	172	first strand
Strand 2	K	255	266	parallel
Strand 3	K	244	252	anti-parallel
Strand 4	K	190	199	anti-parallel
Strand 5	K	202	207	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	169	172	first strand
Strand 2	F	255	266	parallel
Strand 3	F	244	252	anti-parallel
Strand 4	F	190	199	anti-parallel
Strand 5	F	202	207	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	169	172	first strand
Strand 2	L	255	266	parallel
Strand 3	L	244	252	anti-parallel
Strand 4	L	192	199	anti-parallel
Strand 5	L	202	207	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZHH

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZHH