Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZIS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZIS entry

There are 3 chains in PDB entry 9ZIS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLU 2442
B	MET 1	GLU 2442
C	MET 1	GLU 2442

There are255 helices in PDB entry 9ZIS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	19	Right-handed alpha
Helix 2	AA2	A	20	27	Right-handed alpha
Helix 3	AA3	A	29	44	Right-handed alpha
Helix 4	AA4	A	55	87	Right-handed alpha
Helix 5	AA5	A	96	104	Right-handed alpha
Helix 6	AA6	A	116	142	Right-handed alpha
Helix 7	AA7	A	165	204	Right-handed alpha
Helix 8	AA8	A	206	225	Right-handed alpha
Helix 9	AA9	A	233	256	Right-handed alpha
Helix 10	AB1	A	258	265	Right-handed alpha
Helix 11	AB2	A	269	276	Right-handed alpha
Helix 12	AB3	A	303	332	Right-handed alpha
Helix 13	AB4	A	449	482	Right-handed alpha
Helix 14	AB5	A	483	496	Right-handed alpha
Helix 15	AB6	A	502	527	Right-handed alpha
Helix 16	AB7	A	531	536	Right-handed alpha
Helix 17	AB8	A	538	545	Right-handed alpha
Helix 18	AB9	A	551	584	Right-handed alpha
Helix 19	AC1	A	617	652	Right-handed alpha
Helix 20	AC2	A	656	676	Right-handed alpha
Helix 21	AC3	A	676	690	Right-handed alpha
Helix 22	AC4	A	691	707	Right-handed alpha
Helix 23	AC5	A	709	719	Right-handed alpha
Helix 24	AC6	A	721	729	Right-handed alpha
Helix 25	AC7	A	738	763	Right-handed alpha
Helix 26	AC8	A	765	770	Right-handed alpha
Helix 27	AC9	A	808	830	Right-handed alpha
Helix 28	AD1	A	832	845	Right-handed alpha
Helix 29	AD2	A	847	849	Right-handed 310
Helix 30	AD3	A	850	862	Right-handed alpha
Helix 31	AD4	A	864	866	Right-handed 310
Helix 32	AD5	A	867	887	Right-handed alpha
Helix 33	AD6	A	938	962	Right-handed alpha
Helix 34	AD7	A	977	983	Right-handed 310
Helix 35	AD8	A	984	994	Right-handed alpha
Helix 36	AD9	A	996	1017	Right-handed alpha
Helix 37	AE1	A	1018	1033	Right-handed alpha
Helix 38	AE2	A	1039	1052	Right-handed alpha
Helix 39	AE3	A	1052	1063	Right-handed alpha
Helix 40	AE4	A	1072	1078	Right-handed alpha
Helix 41	AE5	A	1082	1093	Right-handed alpha
Helix 42	AE6	A	1104	1127	Right-handed alpha
Helix 43	AE7	A	1157	1169	Right-handed alpha
Helix 44	AE8	A	1173	1185	Right-handed alpha
Helix 45	AE9	A	1187	1209	Right-handed alpha
Helix 46	AF1	A	1215	1228	Right-handed alpha
Helix 47	AF2	A	1228	1236	Right-handed alpha
Helix 48	AF3	A	1236	1247	Right-handed alpha
Helix 49	AF4	A	1260	1267	Right-handed alpha
Helix 50	AF5	A	1281	1292	Right-handed alpha
Helix 51	AF6	A	1303	1318	Right-handed alpha
Helix 52	AF7	A	1320	1338	Right-handed alpha
Helix 53	AF8	A	1339	1384	Right-handed alpha
Helix 54	AF9	A	1396	1400	Right-handed 310
Helix 55	AG1	A	1559	1577	Right-handed alpha
Helix 56	AG2	A	1581	1593	Right-handed alpha
Helix 57	AG3	A	1600	1611	Right-handed alpha
Helix 58	AG4	A	1613	1630	Right-handed alpha
Helix 59	AG5	A	1635	1649	Right-handed alpha
Helix 60	AG6	A	1655	1674	Right-handed alpha
Helix 61	AG7	A	1685	1690	Right-handed alpha
Helix 62	AG8	A	1696	1701	Right-handed alpha
Helix 63	AG9	A	1717	1736	Right-handed alpha
Helix 64	AH1	A	1813	1821	Right-handed alpha
Helix 65	AH2	A	1832	1849	Right-handed alpha
Helix 66	AH3	A	1872	1893	Right-handed alpha
Helix 67	AH4	A	1896	1918	Right-handed alpha
Helix 68	AH5	A	1918	1924	Right-handed alpha
Helix 69	AH6	A	1932	1953	Right-handed alpha
Helix 70	AH7	A	1970	1982	Right-handed alpha
Helix 71	AH8	A	1985	1996	Right-handed alpha
Helix 72	AH9	A	2002	2028	Right-handed alpha
Helix 73	AI1	A	2038	2044	Right-handed alpha
Helix 74	AI2	A	2045	2069	Right-handed alpha
Helix 75	AI3	A	2110	2123	Right-handed alpha
Helix 76	AI4	A	2129	2144	Right-handed alpha
Helix 77	AI5	A	2167	2180	Right-handed alpha
Helix 78	AI6	A	2217	2230	Right-handed alpha
Helix 79	AI7	A	2257	2267	Right-handed alpha
Helix 80	AI8	A	2278	2283	Right-handed alpha
Helix 81	AI9	A	2352	2369	Right-handed alpha
Helix 82	AJ1	A	2370	2377	Right-handed alpha
Helix 83	AJ2	A	2392	2407	Right-handed alpha
Helix 84	AJ3	A	2409	2424	Right-handed alpha
Helix 85	AJ4	A	2426	2434	Right-handed alpha
Helix 86	AJ5	B	4	19	Right-handed alpha
Helix 87	AJ6	B	20	27	Right-handed alpha
Helix 88	AJ7	B	29	44	Right-handed alpha
Helix 89	AJ8	B	55	87	Right-handed alpha
Helix 90	AJ9	B	96	104	Right-handed alpha
Helix 91	AK1	B	116	142	Right-handed alpha
Helix 92	AK2	B	165	204	Right-handed alpha
Helix 93	AK3	B	206	225	Right-handed alpha
Helix 94	AK4	B	233	256	Right-handed alpha
Helix 95	AK5	B	258	265	Right-handed alpha
Helix 96	AK6	B	269	276	Right-handed alpha
Helix 97	AK7	B	303	332	Right-handed alpha
Helix 98	AK8	B	449	482	Right-handed alpha
Helix 99	AK9	B	483	496	Right-handed alpha
Helix 100	AL1	B	502	527	Right-handed alpha
Helix 101	AL2	B	531	536	Right-handed alpha
Helix 102	AL3	B	538	545	Right-handed alpha
Helix 103	AL4	B	551	584	Right-handed alpha
Helix 104	AL5	B	617	652	Right-handed alpha
Helix 105	AL6	B	656	676	Right-handed alpha
Helix 106	AL7	B	676	690	Right-handed alpha
Helix 107	AL8	B	691	707	Right-handed alpha
Helix 108	AL9	B	709	719	Right-handed alpha
Helix 109	AM1	B	721	729	Right-handed alpha
Helix 110	AM2	B	738	763	Right-handed alpha
Helix 111	AM3	B	765	770	Right-handed alpha
Helix 112	AM4	B	808	830	Right-handed alpha
Helix 113	AM5	B	832	845	Right-handed alpha
Helix 114	AM6	B	847	849	Right-handed 310
Helix 115	AM7	B	850	862	Right-handed alpha
Helix 116	AM8	B	864	866	Right-handed 310
Helix 117	AM9	B	867	887	Right-handed alpha
Helix 118	AN1	B	938	962	Right-handed alpha
Helix 119	AN2	B	977	983	Right-handed 310
Helix 120	AN3	B	984	994	Right-handed alpha
Helix 121	AN4	B	996	1017	Right-handed alpha
Helix 122	AN5	B	1018	1033	Right-handed alpha
Helix 123	AN6	B	1039	1052	Right-handed alpha
Helix 124	AN7	B	1052	1063	Right-handed alpha
Helix 125	AN8	B	1072	1078	Right-handed alpha
Helix 126	AN9	B	1082	1093	Right-handed alpha
Helix 127	AO1	B	1104	1127	Right-handed alpha
Helix 128	AO2	B	1157	1169	Right-handed alpha
Helix 129	AO3	B	1173	1185	Right-handed alpha
Helix 130	AO4	B	1187	1209	Right-handed alpha
Helix 131	AO5	B	1215	1228	Right-handed alpha
Helix 132	AO6	B	1228	1236	Right-handed alpha
Helix 133	AO7	B	1236	1247	Right-handed alpha
Helix 134	AO8	B	1260	1267	Right-handed alpha
Helix 135	AO9	B	1281	1292	Right-handed alpha
Helix 136	AP1	B	1303	1318	Right-handed alpha
Helix 137	AP2	B	1320	1338	Right-handed alpha
Helix 138	AP3	B	1339	1384	Right-handed alpha
Helix 139	AP4	B	1396	1400	Right-handed 310
Helix 140	AP5	B	1559	1577	Right-handed alpha
Helix 141	AP6	B	1581	1593	Right-handed alpha
Helix 142	AP7	B	1600	1611	Right-handed alpha
Helix 143	AP8	B	1613	1630	Right-handed alpha
Helix 144	AP9	B	1635	1649	Right-handed alpha
Helix 145	AQ1	B	1655	1674	Right-handed alpha
Helix 146	AQ2	B	1685	1690	Right-handed alpha
Helix 147	AQ3	B	1696	1701	Right-handed alpha
Helix 148	AQ4	B	1717	1736	Right-handed alpha
Helix 149	AQ5	B	1813	1821	Right-handed alpha
Helix 150	AQ6	B	1832	1849	Right-handed alpha
Helix 151	AQ7	B	1872	1893	Right-handed alpha
Helix 152	AQ8	B	1896	1918	Right-handed alpha
Helix 153	AQ9	B	1918	1924	Right-handed alpha
Helix 154	AR1	B	1932	1953	Right-handed alpha
Helix 155	AR2	B	1970	1982	Right-handed alpha
Helix 156	AR3	B	1985	1996	Right-handed alpha
Helix 157	AR4	B	2002	2028	Right-handed alpha
Helix 158	AR5	B	2038	2044	Right-handed alpha
Helix 159	AR6	B	2045	2069	Right-handed alpha
Helix 160	AR7	B	2110	2123	Right-handed alpha
Helix 161	AR8	B	2129	2144	Right-handed alpha
Helix 162	AR9	B	2167	2180	Right-handed alpha
Helix 163	AS1	B	2217	2230	Right-handed alpha
Helix 164	AS2	B	2257	2267	Right-handed alpha
Helix 165	AS3	B	2278	2283	Right-handed alpha
Helix 166	AS4	B	2352	2369	Right-handed alpha
Helix 167	AS5	B	2370	2377	Right-handed alpha
Helix 168	AS6	B	2392	2407	Right-handed alpha
Helix 169	AS7	B	2409	2424	Right-handed alpha
Helix 170	AS8	B	2426	2434	Right-handed alpha
Helix 171	AS9	C	4	19	Right-handed alpha
Helix 172	AT1	C	20	27	Right-handed alpha
Helix 173	AT2	C	29	44	Right-handed alpha
Helix 174	AT3	C	55	87	Right-handed alpha
Helix 175	AT4	C	96	104	Right-handed alpha
Helix 176	AT5	C	116	142	Right-handed alpha
Helix 177	AT6	C	165	204	Right-handed alpha
Helix 178	AT7	C	206	225	Right-handed alpha
Helix 179	AT8	C	233	256	Right-handed alpha
Helix 180	AT9	C	258	265	Right-handed alpha
Helix 181	AU1	C	269	276	Right-handed alpha
Helix 182	AU2	C	303	332	Right-handed alpha
Helix 183	AU3	C	449	482	Right-handed alpha
Helix 184	AU4	C	483	496	Right-handed alpha
Helix 185	AU5	C	502	527	Right-handed alpha
Helix 186	AU6	C	531	536	Right-handed alpha
Helix 187	AU7	C	538	545	Right-handed alpha
Helix 188	AU8	C	551	584	Right-handed alpha
Helix 189	AU9	C	617	652	Right-handed alpha
Helix 190	AV1	C	656	676	Right-handed alpha
Helix 191	AV2	C	676	690	Right-handed alpha
Helix 192	AV3	C	691	707	Right-handed alpha
Helix 193	AV4	C	709	719	Right-handed alpha
Helix 194	AV5	C	721	729	Right-handed alpha
Helix 195	AV6	C	738	763	Right-handed alpha
Helix 196	AV7	C	765	770	Right-handed alpha
Helix 197	AV8	C	808	830	Right-handed alpha
Helix 198	AV9	C	832	845	Right-handed alpha
Helix 199	AW1	C	847	849	Right-handed 310
Helix 200	AW2	C	850	862	Right-handed alpha
Helix 201	AW3	C	864	866	Right-handed 310
Helix 202	AW4	C	867	887	Right-handed alpha
Helix 203	AW5	C	938	962	Right-handed alpha
Helix 204	AW6	C	977	983	Right-handed 310
Helix 205	AW7	C	984	994	Right-handed alpha
Helix 206	AW8	C	996	1017	Right-handed alpha
Helix 207	AW9	C	1018	1033	Right-handed alpha
Helix 208	AX1	C	1041	1052	Right-handed alpha
Helix 209	AX2	C	1052	1063	Right-handed alpha
Helix 210	AX3	C	1072	1078	Right-handed alpha
Helix 211	AX4	C	1082	1093	Right-handed alpha
Helix 212	AX5	C	1104	1127	Right-handed alpha
Helix 213	AX6	C	1157	1169	Right-handed alpha
Helix 214	AX7	C	1173	1185	Right-handed alpha
Helix 215	AX8	C	1187	1209	Right-handed alpha
Helix 216	AX9	C	1215	1228	Right-handed alpha
Helix 217	AY1	C	1228	1236	Right-handed alpha
Helix 218	AY2	C	1236	1247	Right-handed alpha
Helix 219	AY3	C	1260	1267	Right-handed alpha
Helix 220	AY4	C	1281	1292	Right-handed alpha
Helix 221	AY5	C	1303	1318	Right-handed alpha
Helix 222	AY6	C	1320	1338	Right-handed alpha
Helix 223	AY7	C	1339	1384	Right-handed alpha
Helix 224	AY8	C	1396	1400	Right-handed 310
Helix 225	AY9	C	1559	1577	Right-handed alpha
Helix 226	AZ1	C	1581	1593	Right-handed alpha
Helix 227	AZ2	C	1600	1611	Right-handed alpha
Helix 228	AZ3	C	1613	1630	Right-handed alpha
Helix 229	AZ4	C	1635	1649	Right-handed alpha
Helix 230	AZ5	C	1655	1674	Right-handed alpha
Helix 231	AZ6	C	1685	1690	Right-handed alpha
Helix 232	AZ7	C	1696	1701	Right-handed alpha
Helix 233	AZ8	C	1717	1736	Right-handed alpha
Helix 234	AZ9	C	1813	1821	Right-handed alpha
Helix 235	BA1	C	1832	1849	Right-handed alpha
Helix 236	BA2	C	1872	1893	Right-handed alpha
Helix 237	BA3	C	1896	1918	Right-handed alpha
Helix 238	BA4	C	1918	1924	Right-handed alpha
Helix 239	BA5	C	1932	1953	Right-handed alpha
Helix 240	BA6	C	1970	1982	Right-handed alpha
Helix 241	BA7	C	1985	1996	Right-handed alpha
Helix 242	BA8	C	2002	2028	Right-handed alpha
Helix 243	BA9	C	2038	2044	Right-handed alpha
Helix 244	BB1	C	2045	2069	Right-handed alpha
Helix 245	BB2	C	2110	2123	Right-handed alpha
Helix 246	BB3	C	2129	2144	Right-handed alpha
Helix 247	BB4	C	2167	2180	Right-handed alpha
Helix 248	BB5	C	2217	2230	Right-handed alpha
Helix 249	BB6	C	2257	2267	Right-handed alpha
Helix 250	BB7	C	2278	2283	Right-handed alpha
Helix 251	BB8	C	2352	2369	Right-handed alpha
Helix 252	BB9	C	2370	2377	Right-handed alpha
Helix 253	BC1	C	2392	2407	Right-handed alpha
Helix 254	BC2	C	2409	2424	Right-handed alpha
Helix 255	BC3	C	2426	2434	Right-handed alpha

There are 9 sheets in PDB entry 9ZIS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2092	2097	first strand
Strand 2	A	2078	2085	anti-parallel
Strand 3	A	2186	2193	anti-parallel
Strand 4	A	2205	2210	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2106	2107	first strand
Strand 2	A	2151	2156	anti-parallel
Strand 3	A	2334	2340	anti-parallel
Strand 4	A	2245	2248	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2236	2242	first strand
Strand 2	A	2288	2294	anti-parallel
Strand 3	A	2305	2310	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2092	2097	first strand
Strand 2	B	2078	2085	anti-parallel
Strand 3	B	2186	2193	anti-parallel
Strand 4	B	2205	2210	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2106	2107	first strand
Strand 2	B	2151	2156	anti-parallel
Strand 3	B	2334	2340	anti-parallel
Strand 4	B	2245	2248	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2236	2242	first strand
Strand 2	B	2288	2294	anti-parallel
Strand 3	B	2305	2310	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2092	2097	first strand
Strand 2	C	2078	2085	anti-parallel
Strand 3	C	2186	2193	anti-parallel
Strand 4	C	2205	2210	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2106	2107	first strand
Strand 2	C	2151	2156	anti-parallel
Strand 3	C	2334	2340	anti-parallel
Strand 4	C	2245	2248	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2236	2242	first strand
Strand 2	C	2288	2294	anti-parallel
Strand 3	C	2305	2310	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZIS

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZIS