Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZJS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZJS entry

There are 2 chains in PDB entry 9ZJS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 389	ILE 1588
B	GLU 390	VAL 1589

There are116 helices in PDB entry 9ZJS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	390	400	Right-handed alpha
Helix 2	AA2	A	421	433	Right-handed 310
Helix 3	AA3	A	445	450	Right-handed alpha
Helix 4	AA4	A	450	457	Right-handed alpha
Helix 5	AA5	A	466	471	Right-handed alpha
Helix 6	AA6	A	475	483	Right-handed alpha
Helix 7	AA7	A	509	517	Right-handed alpha
Helix 8	AA8	A	517	529	Right-handed alpha
Helix 9	AA9	A	554	568	Right-handed alpha
Helix 10	AB1	A	579	592	Right-handed alpha
Helix 11	AB2	A	597	604	Right-handed alpha
Helix 12	AB3	A	610	620	Right-handed alpha
Helix 13	AB4	A	642	649	Right-handed alpha
Helix 14	AB5	A	668	686	Right-handed alpha
Helix 15	AB6	A	690	699	Right-handed alpha
Helix 16	AB7	A	710	724	Right-handed alpha
Helix 17	AB8	A	743	754	Right-handed alpha
Helix 18	AB9	A	769	783	Right-handed alpha
Helix 19	AC1	A	804	822	Right-handed alpha
Helix 20	AC2	A	840	845	Right-handed alpha
Helix 21	AC3	A	858	876	Right-handed alpha
Helix 22	AC4	A	878	881	Right-handed 310
Helix 23	AC5	A	882	890	Right-handed alpha
Helix 24	AC6	A	893	906	Right-handed alpha
Helix 25	AC7	A	912	928	Right-handed alpha
Helix 26	AC8	A	935	943	Right-handed alpha
Helix 27	AC9	A	955	961	Right-handed alpha
Helix 28	AD1	A	962	965	Right-handed 310
Helix 29	AD2	A	985	1001	Right-handed alpha
Helix 30	AD3	A	1003	1014	Right-handed alpha
Helix 31	AD4	A	1015	1020	Right-handed alpha
Helix 32	AD5	A	1023	1034	Right-handed alpha
Helix 33	AD6	A	1052	1063	Right-handed alpha
Helix 34	AD7	A	1063	1078	Right-handed alpha
Helix 35	AD8	A	1081	1095	Right-handed alpha
Helix 36	AD9	A	1098	1113	Right-handed alpha
Helix 37	AE1	A	1116	1138	Right-handed alpha
Helix 38	AE2	A	1145	1173	Right-handed alpha
Helix 39	AE3	A	1194	1212	Right-handed alpha
Helix 40	AE4	A	1213	1218	Right-handed 310
Helix 41	AE5	A	1221	1233	Right-handed alpha
Helix 42	AE6	A	1244	1258	Right-handed alpha
Helix 43	AE7	A	1259	1277	Right-handed alpha
Helix 44	AE8	A	1285	1307	Right-handed alpha
Helix 45	AE9	A	1325	1339	Right-handed alpha
Helix 46	AF1	A	1343	1349	Right-handed alpha
Helix 47	AF2	A	1350	1352	Right-handed 310
Helix 48	AF3	A	1354	1375	Right-handed alpha
Helix 49	AF4	A	1381	1399	Right-handed alpha
Helix 50	AF5	A	1407	1423	Right-handed alpha
Helix 51	AF6	A	1429	1439	Right-handed alpha
Helix 52	AF7	A	1453	1468	Right-handed alpha
Helix 53	AF8	A	1469	1472	Right-handed 310
Helix 54	AF9	A	1487	1490	Right-handed 310
Helix 55	AG1	A	1495	1501	Right-handed alpha
Helix 56	AG2	A	1510	1515	Right-handed alpha
Helix 57	AG3	A	1520	1527	Right-handed alpha
Helix 58	AG4	B	391	400	Right-handed alpha
Helix 59	AG5	B	421	427	Right-handed alpha
Helix 60	AG6	B	428	434	Right-handed alpha
Helix 61	AG7	B	445	450	Right-handed alpha
Helix 62	AG8	B	453	458	Right-handed alpha
Helix 63	AG9	B	465	471	Right-handed alpha
Helix 64	AH1	B	476	483	Right-handed alpha
Helix 65	AH2	B	509	517	Right-handed alpha
Helix 66	AH3	B	517	529	Right-handed alpha
Helix 67	AH4	B	554	568	Right-handed alpha
Helix 68	AH5	B	579	594	Right-handed alpha
Helix 69	AH6	B	600	603	Right-handed 310
Helix 70	AH7	B	610	621	Right-handed alpha
Helix 71	AH8	B	644	649	Right-handed alpha
Helix 72	AH9	B	664	669	Right-handed alpha
Helix 73	AI1	B	669	686	Right-handed alpha
Helix 74	AI2	B	690	699	Right-handed alpha
Helix 75	AI3	B	708	722	Right-handed alpha
Helix 76	AI4	B	742	754	Right-handed alpha
Helix 77	AI5	B	755	757	Right-handed 310
Helix 78	AI6	B	770	782	Right-handed alpha
Helix 79	AI7	B	805	822	Right-handed alpha
Helix 80	AI8	B	840	845	Right-handed alpha
Helix 81	AI9	B	861	873	Right-handed alpha
Helix 82	AJ1	B	878	881	Right-handed 310
Helix 83	AJ2	B	882	890	Right-handed alpha
Helix 84	AJ3	B	893	906	Right-handed alpha
Helix 85	AJ4	B	912	928	Right-handed alpha
Helix 86	AJ5	B	935	943	Right-handed alpha
Helix 87	AJ6	B	956	961	Right-handed alpha
Helix 88	AJ7	B	962	965	Right-handed 310
Helix 89	AJ8	B	985	1000	Right-handed alpha
Helix 90	AJ9	B	1003	1014	Right-handed alpha
Helix 91	AK1	B	1015	1019	Right-handed 310
Helix 92	AK2	B	1023	1036	Right-handed alpha
Helix 93	AK3	B	1052	1063	Right-handed alpha
Helix 94	AK4	B	1063	1076	Right-handed alpha
Helix 95	AK5	B	1085	1095	Right-handed alpha
Helix 96	AK6	B	1098	1113	Right-handed alpha
Helix 97	AK7	B	1116	1138	Right-handed alpha
Helix 98	AK8	B	1147	1172	Right-handed alpha
Helix 99	AK9	B	1194	1213	Right-handed alpha
Helix 100	AL1	B	1221	1232	Right-handed alpha
Helix 101	AL2	B	1244	1278	Right-handed alpha
Helix 102	AL3	B	1286	1308	Right-handed alpha
Helix 103	AL4	B	1324	1339	Right-handed alpha
Helix 104	AL5	B	1343	1349	Right-handed alpha
Helix 105	AL6	B	1350	1353	Right-handed 310
Helix 106	AL7	B	1354	1375	Right-handed alpha
Helix 107	AL8	B	1381	1399	Right-handed alpha
Helix 108	AL9	B	1407	1420	Right-handed alpha
Helix 109	AM1	B	1429	1440	Right-handed alpha
Helix 110	AM2	B	1449	1451	Right-handed 310
Helix 111	AM3	B	1452	1461	Right-handed alpha
Helix 112	AM4	B	1495	1501	Right-handed alpha
Helix 113	AM5	B	1510	1514	Right-handed alpha
Helix 114	AM6	B	1516	1519	Right-handed 310
Helix 115	AM7	B	1520	1527	Right-handed alpha
Helix 116	AM8	B	1557	1561	Right-handed 310

There are 11 sheets in PDB entry 9ZJS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	462	464	first strand
Strand 2	A	490	493	parallel
Strand 3	A	436	441	parallel
Strand 4	A	412	417	parallel
Strand 5	A	539	545	parallel
Strand 6	A	573	577	parallel
Strand 7	A	605	606	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	631	632	first strand
Strand 2	A	639	640	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	653	655	first strand
Strand 2	A	759	762	anti-parallel
Strand 3	A	794	799	parallel
Strand 4	A	830	837	parallel
Strand 5	A	730	737	parallel
Strand 6	A	850	853	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	933	934	first strand
Strand 2	A	977	983	anti-parallel
Strand 3	A	967	973	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1278	1280	first strand
Strand 2	A	1475	1477	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1492	1494	first strand
Strand 2	A	1479	1483	anti-parallel
Strand 3	A	1571	1577	anti-parallel
Strand 4	A	1530	1531	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1492	1494	first strand
Strand 2	A	1479	1483	anti-parallel
Strand 3	A	1571	1577	anti-parallel
Strand 4	A	1580	1587	anti-parallel
Strand 5	A	1554	1555	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	462	464	first strand
Strand 2	B	490	493	parallel
Strand 3	B	438	441	parallel
Strand 4	B	412	417	parallel
Strand 5	B	539	545	parallel
Strand 6	B	573	577	parallel
Strand 7	B	605	606	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	653	654	first strand
Strand 2	B	759	762	anti-parallel
Strand 3	B	794	799	parallel
Strand 4	B	830	837	parallel
Strand 5	B	734	737	parallel
Strand 6	B	850	853	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	933	934	first strand
Strand 2	B	978	983	anti-parallel
Strand 3	B	967	972	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1492	1494	first strand
Strand 2	B	1481	1483	anti-parallel
Strand 3	B	1568	1577	anti-parallel
Strand 4	B	1580	1588	anti-parallel
Strand 5	B	1549	1555	parallel
Strand 6	B	1539	1543	anti-parallel
Strand 7	B	1529	1534	anti-parallel
Strand 8	B	1568	1577	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZJS

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZJS