Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZJV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZJV entry

There are 2 chains in PDB entry 9ZJV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 390VAL 1589
B
 GLU 390VAL 1589
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 94 helices in PDB entry 9ZJV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
390 399Right-handed alpha
Helix 2
AA2
A
423 427Right-handed 310
Helix 3
AA3
A
429 434Right-handed 310
Helix 4
AA4
A
445 450Right-handed alpha
Helix 5
AA5
A
450 456Right-handed alpha
Helix 6
AA6
A
465 469Right-handed 310
Helix 7
AA7
A
476 483Right-handed alpha
Helix 8
AA8
A
509 517Right-handed alpha
Helix 9
AA9
A
517 529Right-handed alpha
Helix 10
AB1
A
554 568Right-handed alpha
Helix 11
AB2
A
579 591Right-handed alpha
Helix 12
AB3
A
601 603Right-handed 310
Helix 13
AB4
A
610 620Right-handed alpha
Helix 14
AB5
A
642 647Right-handed alpha
Helix 15
AB6
A
668 686Right-handed alpha
Helix 16
AB7
A
690 699Right-handed alpha
Helix 17
AB8
A
710 723Right-handed alpha
Helix 18
AB9
A
742 754Right-handed alpha
Helix 19
AC1
A
769 782Right-handed alpha
Helix 20
AC2
A
803 821Right-handed alpha
Helix 21
AC3
A
840 845Right-handed alpha
Helix 22
AC4
A
858 876Right-handed alpha
Helix 23
AC5
A
878 881Right-handed 310
Helix 24
AC6
A
882 890Right-handed alpha
Helix 25
AC7
A
893 906Right-handed alpha
Helix 26
AC8
A
912 928Right-handed alpha
Helix 27
AC9
A
935 942Right-handed alpha
Helix 28
AD1
A
956 961Right-handed alpha
Helix 29
AD2
A
962 965Right-handed 310
Helix 30
AD3
A
985 1000Right-handed alpha
Helix 31
AD4
A
1003 1014Right-handed alpha
Helix 32
AD5
A
1014 1019Right-handed alpha
Helix 33
AD6
A
1023 1036Right-handed alpha
Helix 34
AD7
A
1052 1062Right-handed alpha
Helix 35
AD8
A
1063 1078Right-handed alpha
Helix 36
AD9
A
1082 1096Right-handed alpha
Helix 37
AE1
A
1098 1113Right-handed alpha
Helix 38
AE2
A
1116 1139Right-handed alpha
Helix 39
AE3
A
1145 1174Right-handed alpha
Helix 40
AE4
A
1194 1212Right-handed alpha
Helix 41
AE5
A
1213 1218Right-handed 310
Helix 42
AE6
A
1221 1232Right-handed alpha
Helix 43
AE7
A
1244 1251Right-handed alpha
Helix 44
AE8
A
1253 1258Right-handed alpha
Helix 45
AE9
A
1259 1277Right-handed alpha
Helix 46
AF1
A
1286 1308Right-handed alpha
Helix 47
AF2
A
1325 1339Right-handed alpha
Helix 48
AF3
A
1343 1350Right-handed alpha
Helix 49
AF4
A
1354 1375Right-handed alpha
Helix 50
AF5
A
1381 1399Right-handed alpha
Helix 51
AF6
A
1407 1423Right-handed alpha
Helix 52
AF7
A
1429 1439Right-handed alpha
Helix 53
AF8
A
1452 1468Right-handed alpha
Helix 54
AF9
A
1469 1472Right-handed 310
Helix 55
AG1
A
1495 1501Right-handed alpha
Helix 56
AG2
A
1515 1519Right-handed 310
Helix 57
AG3
A
1520 1527Right-handed alpha
Helix 58
AG4
A
1557 1561Right-handed 310
Helix 59
AG5
B
391 400Right-handed alpha
Helix 60
AG6
B
421 428Right-handed 310
Helix 61
AG7
B
429 433Right-handed 310
Helix 62
AG8
B
445 450Right-handed alpha
Helix 63
AG9
B
450 459Right-handed alpha
Helix 64
AH1
B
465 471Right-handed alpha
Helix 65
AH2
B
475 483Right-handed alpha
Helix 66
AH3
B
509 529Right-handed alpha
Helix 67
AH4
B
554 568Right-handed alpha
Helix 68
AH5
B
579 594Right-handed alpha
Helix 69
AH6
B
598 604Right-handed alpha
Helix 70
AH7
B
610 620Right-handed alpha
Helix 71
AH8
B
1100 1113Right-handed alpha
Helix 72
AH9
B
1117 1142Right-handed alpha
Helix 73
AI1
B
1145 1172Right-handed alpha
Helix 74
AI2
B
1194 1214Right-handed alpha
Helix 75
AI3
B
1221 1233Right-handed alpha
Helix 76
AI4
B
1244 1253Right-handed alpha
Helix 77
AI5
B
1253 1259Right-handed alpha
Helix 78
AI6
B
1259 1276Right-handed alpha
Helix 79
AI7
B
1286 1307Right-handed alpha
Helix 80
AI8
B
1325 1339Right-handed alpha
Helix 81
AI9
B
1343 1349Right-handed alpha
Helix 82
AJ1
B
1350 1352Right-handed 310
Helix 83
AJ2
B
1354 1375Right-handed alpha
Helix 84
AJ3
B
1381 1399Right-handed alpha
Helix 85
AJ4
B
1407 1423Right-handed alpha
Helix 86
AJ5
B
1429 1440Right-handed alpha
Helix 87
AJ6
B
1448 1451Right-handed 310
Helix 88
AJ7
B
1452 1468Right-handed alpha
Helix 89
AJ8
B
1469 1472Right-handed 310
Helix 90
AJ9
B
1487 1490Right-handed 310
Helix 91
AK1
B
1495 1500Right-handed alpha
Helix 92
AK2
B
1507 1515Right-handed alpha
Helix 93
AK3
B
1516 1519Right-handed 310
Helix 94
AK4
B
1520 1527Right-handed alpha
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There are 9 sheets in PDB entry 9ZJV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 464first strand
Strand 2
A
490 493parallel
Strand 3
A
438 441parallel
Strand 4
A
412 417parallel
Strand 5
A
539 545parallel
Strand 6
A
573 577parallel
Strand 7
A
605 606parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
630 632first strand
Strand 2
A
639 641anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
653 654first strand
Strand 2
A
761 762anti-parallel
Strand 3
A
794 799parallel
Strand 4
A
830 837parallel
Strand 5
A
730 737parallel
Strand 6
A
852 853parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
933 934first strand
Strand 2
A
979 983anti-parallel
Strand 3
A
967 971anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1278 1280first strand
Strand 2
A
1475 1477anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1492 1494first strand
Strand 2
A
1479 1483anti-parallel
Strand 3
A
1569 1577anti-parallel
Strand 4
A
1580 1584anti-parallel
Strand 5
A
1550 1555parallel
Strand 6
A
1538 1542anti-parallel
Strand 7
A
1530 1535anti-parallel
Strand 8
A
1569 1577anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
462 464first strand
Strand 2
B
490 493parallel
Strand 3
B
438 441parallel
Strand 4
B
412 417parallel
Strand 5
B
539 545parallel
Strand 6
B
573 577parallel
Strand 7
B
605 606parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1278 1280first strand
Strand 2
B
1475 1477anti-parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1492 1494first strand
Strand 2
B
1479 1483anti-parallel
Strand 3
B
1569 1577anti-parallel
Strand 4
B
1580 1588anti-parallel
Strand 5
B
1549 1555parallel
Strand 6
B
1539 1543anti-parallel
Strand 7
B
1530 1534anti-parallel
Strand 8
B
1569 1577anti-parallel
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