Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZJW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZJW entry

There are 2 chains in PDB entry 9ZJW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 389	VAL 1589
B	ARG 389	VAL 1589

There are122 helices in PDB entry 9ZJW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	389	400	Right-handed alpha
Helix 2	AA2	A	421	428	Right-handed 310
Helix 3	AA3	A	429	434	Right-handed 310
Helix 4	AA4	A	445	450	Right-handed alpha
Helix 5	AA5	A	450	456	Right-handed alpha
Helix 6	AA6	A	465	470	Right-handed 310
Helix 7	AA7	A	476	484	Right-handed alpha
Helix 8	AA8	A	509	517	Right-handed alpha
Helix 9	AA9	A	517	529	Right-handed alpha
Helix 10	AB1	A	554	568	Right-handed alpha
Helix 11	AB2	A	579	594	Right-handed alpha
Helix 12	AB3	A	601	603	Right-handed 310
Helix 13	AB4	A	610	620	Right-handed alpha
Helix 14	AB5	A	642	647	Right-handed alpha
Helix 15	AB6	A	664	667	Right-handed 310
Helix 16	AB7	A	668	686	Right-handed alpha
Helix 17	AB8	A	690	699	Right-handed alpha
Helix 18	AB9	A	710	720	Right-handed alpha
Helix 19	AC1	A	742	754	Right-handed alpha
Helix 20	AC2	A	769	782	Right-handed alpha
Helix 21	AC3	A	805	821	Right-handed alpha
Helix 22	AC4	A	840	845	Right-handed alpha
Helix 23	AC5	A	858	876	Right-handed alpha
Helix 24	AC6	A	878	881	Right-handed 310
Helix 25	AC7	A	882	890	Right-handed alpha
Helix 26	AC8	A	893	906	Right-handed alpha
Helix 27	AC9	A	912	928	Right-handed alpha
Helix 28	AD1	A	935	943	Right-handed alpha
Helix 29	AD2	A	956	961	Right-handed alpha
Helix 30	AD3	A	962	965	Right-handed 310
Helix 31	AD4	A	985	1001	Right-handed alpha
Helix 32	AD5	A	1003	1013	Right-handed alpha
Helix 33	AD6	A	1023	1036	Right-handed alpha
Helix 34	AD7	A	1052	1062	Right-handed alpha
Helix 35	AD8	A	1064	1078	Right-handed alpha
Helix 36	AD9	A	1081	1095	Right-handed alpha
Helix 37	AE1	A	1098	1113	Right-handed alpha
Helix 38	AE2	A	1116	1139	Right-handed alpha
Helix 39	AE3	A	1145	1174	Right-handed alpha
Helix 40	AE4	A	1194	1212	Right-handed alpha
Helix 41	AE5	A	1213	1218	Right-handed 310
Helix 42	AE6	A	1221	1233	Right-handed alpha
Helix 43	AE7	A	1244	1252	Right-handed alpha
Helix 44	AE8	A	1253	1258	Right-handed alpha
Helix 45	AE9	A	1259	1277	Right-handed alpha
Helix 46	AF1	A	1282	1284	Right-handed 310
Helix 47	AF2	A	1285	1308	Right-handed alpha
Helix 48	AF3	A	1325	1339	Right-handed alpha
Helix 49	AF4	A	1343	1350	Right-handed alpha
Helix 50	AF5	A	1351	1353	Right-handed 310
Helix 51	AF6	A	1354	1375	Right-handed alpha
Helix 52	AF7	A	1381	1399	Right-handed alpha
Helix 53	AF8	A	1407	1423	Right-handed alpha
Helix 54	AF9	A	1429	1440	Right-handed alpha
Helix 55	AG1	A	1448	1451	Right-handed 310
Helix 56	AG2	A	1452	1468	Right-handed alpha
Helix 57	AG3	A	1487	1490	Right-handed 310
Helix 58	AG4	A	1495	1502	Right-handed alpha
Helix 59	AG5	A	1520	1525	Right-handed alpha
Helix 60	AG6	A	1557	1561	Right-handed 310
Helix 61	AG7	B	390	400	Right-handed alpha
Helix 62	AG8	B	422	428	Right-handed 310
Helix 63	AG9	B	429	434	Right-handed 310
Helix 64	AH1	B	445	450	Right-handed alpha
Helix 65	AH2	B	450	457	Right-handed alpha
Helix 66	AH3	B	465	470	Right-handed 310
Helix 67	AH4	B	476	484	Right-handed alpha
Helix 68	AH5	B	509	517	Right-handed alpha
Helix 69	AH6	B	517	529	Right-handed alpha
Helix 70	AH7	B	554	568	Right-handed alpha
Helix 71	AH8	B	579	594	Right-handed alpha
Helix 72	AH9	B	601	603	Right-handed 310
Helix 73	AI1	B	610	620	Right-handed alpha
Helix 74	AI2	B	642	649	Right-handed alpha
Helix 75	AI3	B	664	667	Right-handed 310
Helix 76	AI4	B	668	686	Right-handed alpha
Helix 77	AI5	B	690	699	Right-handed alpha
Helix 78	AI6	B	710	720	Right-handed alpha
Helix 79	AI7	B	742	754	Right-handed alpha
Helix 80	AI8	B	769	782	Right-handed alpha
Helix 81	AI9	B	803	821	Right-handed alpha
Helix 82	AJ1	B	840	845	Right-handed alpha
Helix 83	AJ2	B	858	876	Right-handed alpha
Helix 84	AJ3	B	878	881	Right-handed 310
Helix 85	AJ4	B	882	890	Right-handed alpha
Helix 86	AJ5	B	893	906	Right-handed alpha
Helix 87	AJ6	B	912	928	Right-handed alpha
Helix 88	AJ7	B	935	942	Right-handed alpha
Helix 89	AJ8	B	956	961	Right-handed alpha
Helix 90	AJ9	B	962	965	Right-handed 310
Helix 91	AK1	B	985	1001	Right-handed alpha
Helix 92	AK2	B	1003	1013	Right-handed alpha
Helix 93	AK3	B	1023	1036	Right-handed alpha
Helix 94	AK4	B	1052	1062	Right-handed alpha
Helix 95	AK5	B	1063	1078	Right-handed alpha
Helix 96	AK6	B	1081	1095	Right-handed alpha
Helix 97	AK7	B	1098	1113	Right-handed alpha
Helix 98	AK8	B	1116	1139	Right-handed alpha
Helix 99	AK9	B	1140	1142	Right-handed 310
Helix 100	AL1	B	1145	1174	Right-handed alpha
Helix 101	AL2	B	1194	1212	Right-handed alpha
Helix 102	AL3	B	1213	1218	Right-handed 310
Helix 103	AL4	B	1221	1233	Right-handed alpha
Helix 104	AL5	B	1244	1253	Right-handed alpha
Helix 105	AL6	B	1253	1258	Right-handed alpha
Helix 106	AL7	B	1259	1276	Right-handed alpha
Helix 107	AL8	B	1282	1284	Right-handed 310
Helix 108	AL9	B	1285	1308	Right-handed alpha
Helix 109	AM1	B	1325	1339	Right-handed alpha
Helix 110	AM2	B	1343	1349	Right-handed alpha
Helix 111	AM3	B	1350	1353	Right-handed 310
Helix 112	AM4	B	1354	1375	Right-handed alpha
Helix 113	AM5	B	1381	1399	Right-handed alpha
Helix 114	AM6	B	1407	1420	Right-handed alpha
Helix 115	AM7	B	1429	1440	Right-handed alpha
Helix 116	AM8	B	1448	1451	Right-handed 310
Helix 117	AM9	B	1452	1468	Right-handed alpha
Helix 118	AN1	B	1469	1472	Right-handed 310
Helix 119	AN2	B	1487	1490	Right-handed 310
Helix 120	AN3	B	1495	1501	Right-handed alpha
Helix 121	AN4	B	1520	1525	Right-handed alpha
Helix 122	AN5	B	1557	1561	Right-handed 310

There are 12 sheets in PDB entry 9ZJW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	462	464	first strand
Strand 2	A	490	493	parallel
Strand 3	A	436	441	parallel
Strand 4	A	412	417	parallel
Strand 5	A	539	545	parallel
Strand 6	A	573	577	parallel
Strand 7	A	605	606	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	631	632	first strand
Strand 2	A	639	640	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	652	655	first strand
Strand 2	A	759	763	anti-parallel
Strand 3	A	794	799	parallel
Strand 4	A	830	837	parallel
Strand 5	A	730	737	parallel
Strand 6	A	850	853	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	933	934	first strand
Strand 2	A	977	983	anti-parallel
Strand 3	A	967	973	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1278	1280	first strand
Strand 2	A	1475	1477	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1492	1494	first strand
Strand 2	A	1479	1483	anti-parallel
Strand 3	A	1569	1577	anti-parallel
Strand 4	A	1580	1588	anti-parallel
Strand 5	A	1550	1555	parallel
Strand 6	A	1538	1542	anti-parallel
Strand 7	A	1529	1535	anti-parallel
Strand 8	A	1569	1577	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	462	464	first strand
Strand 2	B	490	493	parallel
Strand 3	B	436	441	parallel
Strand 4	B	412	417	parallel
Strand 5	B	539	545	parallel
Strand 6	B	573	577	parallel
Strand 7	B	605	606	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	631	632	first strand
Strand 2	B	639	640	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	652	654	first strand
Strand 2	B	759	763	anti-parallel
Strand 3	B	794	799	parallel
Strand 4	B	830	837	parallel
Strand 5	B	730	737	parallel
Strand 6	B	850	853	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	933	934	first strand
Strand 2	B	977	983	anti-parallel
Strand 3	B	967	973	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1278	1280	first strand
Strand 2	B	1475	1477	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1492	1494	first strand
Strand 2	B	1481	1483	anti-parallel
Strand 3	B	1569	1576	anti-parallel
Strand 4	B	1582	1588	anti-parallel
Strand 5	B	1550	1555	parallel
Strand 6	B	1539	1542	anti-parallel
Strand 7	B	1530	1534	anti-parallel
Strand 8	B	1569	1576	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZJW

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZJW