Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZKF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZKF entry

There is 1 chain in PDB entry 9ZKF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 30GLU 730
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 9ZKF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
84 96Right-handed alpha
Helix 2
AA2
A
127 131Right-handed 310
Helix 3
AA3
A
187 189Right-handed 310
Helix 4
AA4
A
190 199Right-handed alpha
Helix 5
AA5
A
213 223Right-handed alpha
Helix 6
AA6
A
226 235Right-handed alpha
Helix 7
AA7
A
236 239Right-handed 310
Helix 8
AA8
A
242 246Right-handed 310
Helix 9
AA9
A
280 291Right-handed alpha
Helix 10
AB1
A
293 305Right-handed alpha
Helix 11
AB2
A
319 323Right-handed 310
Helix 12
AB3
A
358 363Right-handed alpha
Helix 13
AB4
A
382 401Right-handed alpha
Helix 14
AB5
A
404 412Right-handed 310
Helix 15
AB6
A
475 479Right-handed 310
Helix 16
AB7
A
482 490Right-handed alpha
Helix 17
AB8
A
493 511Right-handed alpha
Helix 18
AB9
A
513 526Right-handed alpha
Helix 19
AC1
A
528 540Right-handed alpha
Helix 20
AC2
A
547 551Right-handed 310
Helix 21
AC3
A
582 592Right-handed alpha
Helix 22
AC4
A
592 599Right-handed alpha
Helix 23
AC5
A
619 621Right-handed 310
Helix 24
AC6
A
622 626Right-handed 310
Helix 25
AC7
A
635 640Right-handed 310
Helix 26
AC8
A
641 648Right-handed alpha
Helix 27
AC9
A
660 673Right-handed alpha
Helix 28
AD1
A
681 689Right-handed alpha
Helix 29
AD2
A
702 704Right-handed 310
Helix 30
AD3
A
705 720Right-handed alpha
Helix 31
AD4
A
722 726Right-handed 310
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There are 2 sheets in PDB entry 9ZKF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 378first strand
Strand 2
A
254 257anti-parallel
Strand 3
A
263 272anti-parallel
Strand 4
A
310 318anti-parallel
Strand 5
A
345 354anti-parallel
Strand 6
A
108 117anti-parallel
Strand 7
A
136 144anti-parallel
Strand 8
A
161 168anti-parallel
Strand 9
A
171 178anti-parallel
Strand 10
A
248 249anti-parallel
Strand 11
A
263 272anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 617first strand
Strand 2
A
602 607parallel
Strand 3
A
573 577parallel
Strand 4
A
628 631parallel
Strand 5
A
676 679parallel
Strand 6
A
698 701parallel
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