Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZKT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZKT entry

There are 9 chains in PDB entry 9ZKT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 507LYS 813
B
 SER 510ARG 819
C
 SER 506SER 831
D
 SER 510ARG 819
E
 ALA 2PHE 160
F
 ALA 2PHE 160
G
 GLY 18ARG 231
H
 GLY 18ARG 231
M
 SER 260GLN 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 9ZKT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
511 515Right-handed 310
Helix 2
AA2
A
518 541Right-handed alpha
Helix 3
AA3
A
569 581Right-handed alpha
Helix 4
AA4
A
591 625Right-handed alpha
Helix 5
AA5
A
788 813Right-handed alpha
Helix 6
AA6
B
515 519Right-handed 310
Helix 7
AA7
B
522 547Right-handed alpha
Helix 8
AA8
B
572 585Right-handed alpha
Helix 9
AA9
B
595 626Right-handed alpha
Helix 10
AB1
B
792 819Right-handed alpha
Helix 11
AB2
C
511 515Right-handed 310
Helix 12
AB3
C
518 542Right-handed alpha
Helix 13
AB4
C
568 581Right-handed alpha
Helix 14
AB5
C
591 625Right-handed alpha
Helix 15
AB6
C
784 787Right-handed 310
Helix 16
AB7
C
788 820Right-handed alpha
Helix 17
AB8
D
515 519Right-handed 310
Helix 18
AB9
D
522 547Right-handed alpha
Helix 19
AC1
D
572 585Right-handed alpha
Helix 20
AC2
D
595 626Right-handed alpha
Helix 21
AC3
D
788 819Right-handed alpha
Helix 22
AC4
E
4 36Right-handed alpha
Helix 23
AC5
E
57 85Right-handed alpha
Helix 24
AC6
E
87 108Right-handed alpha
Helix 25
AC7
E
127 159Right-handed alpha
Helix 26
AC8
F
4 38Right-handed alpha
Helix 27
AC9
F
52 85Right-handed alpha
Helix 28
AD1
F
87 107Right-handed alpha
Helix 29
AD2
F
126 157Right-handed alpha
Helix 30
AD3
G
19 41Right-handed alpha
Helix 31
AD4
G
118 128Right-handed alpha
Helix 32
AD5
G
128 147Right-handed alpha
Helix 33
AD6
G
156 185Right-handed alpha
Helix 34
AD7
G
202 231Right-handed alpha
Helix 35
AD8
H
19 41Right-handed alpha
Helix 36
AD9
H
118 128Right-handed alpha
Helix 37
AE1
H
128 148Right-handed alpha
Helix 38
AE2
H
155 185Right-handed alpha
Helix 39
AE3
H
202 231Right-handed alpha
Helix 40
AE4
M
261 298Right-handed alpha
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There are 3 sheets in PDB entry 9ZKT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
100 102first strand
Strand 2
G
88 91anti-parallel
Strand 3
G
81 84anti-parallel
Strand 4
G
45 48anti-parallel
Strand 5
G
200 201anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
45 46first strand
Strand 2
H
200 201anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
81 84first strand
Strand 2
H
88 92anti-parallel
Strand 3
H
100 102anti-parallel
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