Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZKW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZKW entry

There are 7 chains in PDB entry 9ZKW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 390	LYS 813
B	VAL 396	ARG 819
C	THR 390	LYS 813
D	VAL 396	ARG 819
E	PHE 4	ALA 210
G	VAL 19	ARG 231
H	VAL 19	ARG 231

There are 85 helices in PDB entry 9ZKW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	412	417	Right-handed 310
Helix 2	AA2	A	419	433	Right-handed alpha
Helix 3	AA3	A	459	465	Right-handed alpha
Helix 4	AA4	A	478	483	Right-handed alpha
Helix 5	AA5	A	511	515	Right-handed 310
Helix 6	AA6	A	518	540	Right-handed alpha
Helix 7	AA7	A	568	581	Right-handed alpha
Helix 8	AA8	A	591	625	Right-handed alpha
Helix 9	AA9	A	631	638	Right-handed alpha
Helix 10	AB1	A	649	658	Right-handed alpha
Helix 11	AB2	A	660	672	Right-handed alpha
Helix 12	AB3	A	681	693	Right-handed alpha
Helix 13	AB4	A	702	711	Right-handed alpha
Helix 14	AB5	A	739	752	Right-handed alpha
Helix 15	AB6	A	753	764	Right-handed alpha
Helix 16	AB7	A	788	813	Right-handed alpha
Helix 17	AB8	B	416	419	Right-handed 310
Helix 18	AB9	B	423	437	Right-handed alpha
Helix 19	AC1	B	461	469	Right-handed alpha
Helix 20	AC2	B	482	489	Right-handed alpha
Helix 21	AC3	B	515	519	Right-handed 310
Helix 22	AC4	B	522	544	Right-handed alpha
Helix 23	AC5	B	573	585	Right-handed alpha
Helix 24	AC6	B	595	626	Right-handed alpha
Helix 25	AC7	B	635	643	Right-handed alpha
Helix 26	AC8	B	653	661	Right-handed alpha
Helix 27	AC9	B	664	675	Right-handed alpha
Helix 28	AD1	B	685	695	Right-handed alpha
Helix 29	AD2	B	696	698	Right-handed 310
Helix 30	AD3	B	706	714	Right-handed alpha
Helix 31	AD4	B	742	756	Right-handed alpha
Helix 32	AD5	B	757	768	Right-handed alpha
Helix 33	AD6	B	776	780	Right-handed 310
Helix 34	AD7	B	793	819	Right-handed alpha
Helix 35	AD8	C	412	415	Right-handed 310
Helix 36	AD9	C	419	431	Right-handed alpha
Helix 37	AE1	C	451	454	Right-handed 310
Helix 38	AE2	C	458	465	Right-handed alpha
Helix 39	AE3	C	478	483	Right-handed alpha
Helix 40	AE4	C	511	515	Right-handed 310
Helix 41	AE5	C	518	540	Right-handed alpha
Helix 42	AE6	C	569	581	Right-handed alpha
Helix 43	AE7	C	591	626	Right-handed alpha
Helix 44	AE8	C	631	638	Right-handed alpha
Helix 45	AE9	C	649	658	Right-handed alpha
Helix 46	AF1	C	660	672	Right-handed alpha
Helix 47	AF2	C	681	691	Right-handed alpha
Helix 48	AF3	C	702	711	Right-handed alpha
Helix 49	AF4	C	738	752	Right-handed alpha
Helix 50	AF5	C	753	764	Right-handed alpha
Helix 51	AF6	C	788	813	Right-handed alpha
Helix 52	AF7	D	423	437	Right-handed alpha
Helix 53	AF8	D	461	469	Right-handed alpha
Helix 54	AF9	D	482	487	Right-handed alpha
Helix 55	AG1	D	515	519	Right-handed 310
Helix 56	AG2	D	522	544	Right-handed alpha
Helix 57	AG3	D	572	585	Right-handed alpha
Helix 58	AG4	D	595	626	Right-handed alpha
Helix 59	AG5	D	635	641	Right-handed alpha
Helix 60	AG6	D	653	661	Right-handed alpha
Helix 61	AG7	D	664	676	Right-handed alpha
Helix 62	AG8	D	685	694	Right-handed alpha
Helix 63	AG9	D	706	712	Right-handed alpha
Helix 64	AH1	D	713	715	Right-handed 310
Helix 65	AH2	D	742	757	Right-handed alpha
Helix 66	AH3	D	757	768	Right-handed alpha
Helix 67	AH4	D	777	781	Right-handed 310
Helix 68	AH5	D	793	819	Right-handed alpha
Helix 69	AH6	E	5	30	Right-handed alpha
Helix 70	AH7	E	92	105	Right-handed alpha
Helix 71	AH8	E	105	128	Right-handed alpha
Helix 72	AH9	E	132	161	Right-handed alpha
Helix 73	AI1	E	177	210	Right-handed alpha
Helix 74	AI2	G	20	40	Right-handed alpha
Helix 75	AI3	G	118	128	Right-handed alpha
Helix 76	AI4	G	128	150	Right-handed alpha
Helix 77	AI5	G	155	184	Right-handed alpha
Helix 78	AI6	G	202	231	Right-handed alpha
Helix 79	AI7	H	20	41	Right-handed alpha
Helix 80	AI8	H	93	95	Right-handed 310
Helix 81	AI9	H	118	128	Right-handed alpha
Helix 82	AJ1	H	128	147	Right-handed alpha
Helix 83	AJ2	H	148	150	Right-handed 310
Helix 84	AJ3	H	157	184	Right-handed alpha
Helix 85	AJ4	H	202	231	Right-handed alpha

There are 22 sheets in PDB entry 9ZKW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	391	395	first strand
Strand 2	A	436	440	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	447	449	first strand
Strand 2	A	456	458	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	486	487	first strand
Strand 2	A	731	732	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	493	494	first strand
Strand 2	A	726	727	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	642	644	first strand
Strand 2	A	696	701	parallel
Strand 3	A	496	501	anti-parallel
Strand 4	A	716	719	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	442	444	first strand
Strand 2	B	397	399	parallel
Strand 3	B	474	480	parallel
Strand 4	B	730	736	anti-parallel
Strand 5	B	490	491	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	442	444	first strand
Strand 2	B	397	399	parallel
Strand 3	B	474	480	parallel
Strand 4	B	730	736	anti-parallel
Strand 5	B	496	498	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	407	408	first strand
Strand 2	B	421	422	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	453	454	first strand
Strand 2	B	459	460	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	646	649	first strand
Strand 2	B	700	705	parallel
Strand 3	B	500	505	anti-parallel
Strand 4	B	720	722	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	392	395	first strand
Strand 2	C	437	440	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	403	404	first strand
Strand 2	C	417	418	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	448	450	first strand
Strand 2	C	455	457	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	486	487	first strand
Strand 2	C	731	732	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	493	494	first strand
Strand 2	C	726	727	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	642	644	first strand
Strand 2	C	696	701	parallel
Strand 3	C	496	501	anti-parallel
Strand 4	C	716	719	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	489	491	first strand
Strand 2	D	735	737	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	496	498	first strand
Strand 2	D	730	732	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	682	683	first strand
Strand 2	D	646	650	parallel
Strand 3	D	700	705	parallel
Strand 4	D	500	504	anti-parallel
Strand 5	D	721	723	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	34	39	first strand
Strand 2	E	56	61	anti-parallel
Strand 3	E	65	68	anti-parallel
Strand 4	E	78	79	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	101	102	first strand
Strand 2	G	88	91	anti-parallel
Strand 3	G	81	84	anti-parallel
Strand 4	G	45	48	anti-parallel
Strand 5	G	199	201	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	101	102	first strand
Strand 2	H	88	91	anti-parallel
Strand 3	H	82	84	anti-parallel
Strand 4	H	45	47	anti-parallel
Strand 5	H	200	201	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZKW

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZKW