Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZLK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZLK entry

There is 1 chain in PDB entry 9ZLK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 14LEU 910
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 40 helices in PDB entry 9ZLK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 25Right-handed 310
Helix 2
AA2
A
26 33Right-handed alpha
Helix 3
AA3
A
34 43Right-handed alpha
Helix 4
AA4
A
50 62Right-handed alpha
Helix 5
AA5
A
73 79Right-handed alpha
Helix 6
AA6
A
84 102Right-handed alpha
Helix 7
AA7
A
112 135Right-handed alpha
Helix 8
AA8
A
166 168Right-handed 310
Helix 9
AA9
A
198 203Right-handed alpha
Helix 10
AB1
A
221 225Right-handed 310
Helix 11
AB2
A
247 250Right-handed 310
Helix 12
AB3
A
251 257Right-handed alpha
Helix 13
AB4
A
268 298Right-handed alpha
Helix 14
AB5
A
301 316Right-handed alpha
Helix 15
AB6
A
320 339Right-handed alpha
Helix 16
AB7
A
347 354Right-handed alpha
Helix 17
AB8
A
384 398Right-handed alpha
Helix 18
AB9
A
403 416Right-handed alpha
Helix 19
AC1
A
468 473Right-handed alpha
Helix 20
AC2
A
490 505Right-handed alpha
Helix 21
AC3
A
525 529Right-handed 310
Helix 22
AC4
A
547 558Right-handed alpha
Helix 23
AC5
A
569 581Right-handed alpha
Helix 24
AC6
A
589 594Right-handed alpha
Helix 25
AC7
A
599 607Right-handed alpha
Helix 26
AC8
A
615 628Right-handed alpha
Helix 27
AC9
A
639 641Right-handed 310
Helix 28
AD1
A
642 649Right-handed alpha
Helix 29
AD2
A
659 666Right-handed alpha
Helix 30
AD3
A
674 713Right-handed alpha
Helix 31
AD4
A
723 738Right-handed alpha
Helix 32
AD5
A
739 744Right-handed 310
Helix 33
AD6
A
761 787Right-handed alpha
Helix 34
AD7
A
787 794Right-handed alpha
Helix 35
AD8
A
795 799Right-handed 310
Helix 36
AD9
A
803 828Right-handed alpha
Helix 37
AE1
A
828 833Right-handed alpha
Helix 38
AE2
A
845 862Right-handed alpha
Helix 39
AE3
A
865 871Right-handed alpha
Helix 40
AE4
A
879 907Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 9ZLK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 164first strand
Strand 2
A
150 155anti-parallel
Strand 3
A
173 176anti-parallel
Strand 4
A
234 246anti-parallel
Strand 5
A
185 197anti-parallel
Strand 6
A
208 209anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 343first strand
Strand 2
A
668 670anti-parallel
Strand 3
A
651 655parallel
Strand 4
A
633 636parallel
Strand 5
A
357 360parallel
Strand 6
A
561 565parallel
Strand 7
A
610 611parallel
Strand 8
A
587 588parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 377first strand
Strand 2
A
533 541anti-parallel
Strand 3
A
507 513anti-parallel
Strand 4
A
460 466anti-parallel
Strand 5
A
444 451anti-parallel
Strand 6
A
430 436anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 377first strand
Strand 2
A
533 541anti-parallel
Strand 3
A
477 480parallel
Strand 4
A
483 486anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il