Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZMS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZMS entry

There are 2 chains in PDB entry 9ZMS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 0ILE 482
B
 PRO 0ILE 482
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 9ZMS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 22Right-handed alpha
Helix 2
AA2
A
43 53Right-handed alpha
Helix 3
AA3
A
55 72Right-handed alpha
Helix 4
AA4
A
76 84Right-handed alpha
Helix 5
AA5
A
85 100Right-handed alpha
Helix 6
AA6
A
103 108Right-handed alpha
Helix 7
AA7
A
109 114Right-handed alpha
Helix 8
AA8
A
119 138Right-handed alpha
Helix 9
AA9
A
142 146Right-handed 310
Helix 10
AB1
A
159 161Right-handed 310
Helix 11
AB2
A
162 182Right-handed alpha
Helix 12
AB3
A
194 205Right-handed alpha
Helix 13
AB4
A
206 207Right-handed 310
Helix 14
AB5
A
208 214Right-handed 310
Helix 15
AB6
A
229 243Right-handed alpha
Helix 16
AB7
A
244 264Right-handed alpha
Helix 17
AB8
A
265 268Right-handed 310
Helix 18
AB9
A
269 293Right-handed alpha
Helix 19
AC1
A
294 302Right-handed alpha
Helix 20
AC2
A
305 317Right-handed alpha
Helix 21
AC3
A
323 337Right-handed alpha
Helix 22
AC4
A
340 351Right-handed alpha
Helix 23
AC5
A
354 361Right-handed alpha
Helix 24
AC6
A
371 375Right-handed 310
Helix 25
AC7
A
384 393Right-handed alpha
Helix 26
AC8
A
399 406Right-handed 310
Helix 27
AC9
A
409 416Right-handed 310
Helix 28
AD1
A
419 423Right-handed 310
Helix 29
AD2
A
424 441Right-handed alpha
Helix 30
AD3
A
449 460Right-handed alpha
Helix 31
AD4
A
475 479Right-handed 310
Helix 32
AD5
B
9 23Right-handed alpha
Helix 33
AD6
B
43 52Right-handed alpha
Helix 34
AD7
B
55 72Right-handed alpha
Helix 35
AD8
B
76 84Right-handed alpha
Helix 36
AD9
B
85 100Right-handed alpha
Helix 37
AE1
B
103 108Right-handed alpha
Helix 38
AE2
B
109 114Right-handed alpha
Helix 39
AE3
B
119 137Right-handed alpha
Helix 40
AE4
B
142 146Right-handed 310
Helix 41
AE5
B
159 161Right-handed 310
Helix 42
AE6
B
162 181Right-handed alpha
Helix 43
AE7
B
196 205Right-handed alpha
Helix 44
AE8
B
206 207Right-handed 310
Helix 45
AE9
B
208 214Right-handed 310
Helix 46
AF1
B
229 243Right-handed alpha
Helix 47
AF2
B
244 264Right-handed alpha
Helix 48
AF3
B
265 268Right-handed 310
Helix 49
AF4
B
269 295Right-handed alpha
Helix 50
AF5
B
296 302Right-handed alpha
Helix 51
AF6
B
305 317Right-handed alpha
Helix 52
AF7
B
323 337Right-handed alpha
Helix 53
AF8
B
340 351Right-handed alpha
Helix 54
AF9
B
354 362Right-handed alpha
Helix 55
AG1
B
371 375Right-handed 310
Helix 56
AG2
B
384 393Right-handed alpha
Helix 57
AG3
B
399 406Right-handed 310
Helix 58
AG4
B
411 416Right-handed 310
Helix 59
AG5
B
424 441Right-handed alpha
Helix 60
AG6
B
449 460Right-handed alpha
Helix 61
AG7
B
475 479Right-handed 310
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There are 2 sheets in PDB entry 9ZMS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 157first strand
Strand 2
A
480 482parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 156first strand
Strand 2
B
480 481parallel
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