Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZMV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZMV entry

There is 1 chain in PDB entry 9ZMV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1LYS 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 9ZMV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 11Right-handed 310
Helix 2
AA2
A
24 36Right-handed alpha
Helix 3
AA3
A
49 58Right-handed alpha
Helix 4
AA4
A
59 61Right-handed 310
Helix 5
AA5
A
77 96Right-handed alpha
Helix 6
AA6
A
116 120Right-handed 310
Helix 7
AA7
A
124 126Right-handed 310
Helix 8
AA8
A
127 145Right-handed alpha
Helix 9
AA9
A
161 171Right-handed alpha
Helix 10
AB1
A
182 188Right-handed alpha
Helix 11
AB2
A
191 200Right-handed alpha
Helix 12
AB3
A
212 223Right-handed alpha
Helix 13
AB4
A
225 233Right-handed alpha
Helix 14
AB5
A
246 257Right-handed alpha
Helix 15
AB6
A
275 294Right-handed alpha
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There are 2 sheets in PDB entry 9ZMV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
39 40parallel
Strand 3
A
2 6parallel
Strand 4
A
261 265parallel
Strand 5
A
203 207parallel
Strand 6
A
177 181parallel
Strand 7
A
148 152parallel
Strand 8
A
99 104parallel
Strand 9
A
68 71parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 211first strand
Strand 2
A
235 236anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il