Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZMW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZMW entry

There are 3 chains in PDB entry 9ZMW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0GLY 299
B
 HIS 0GLY 299
C
 HIS 0LYS 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 9ZMW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 11Right-handed 310
Helix 2
AA2
A
24 36Right-handed alpha
Helix 3
AA3
A
49 58Right-handed alpha
Helix 4
AA4
A
59 61Right-handed 310
Helix 5
AA5
A
77 96Right-handed alpha
Helix 6
AA6
A
116 120Right-handed 310
Helix 7
AA7
A
124 126Right-handed 310
Helix 8
AA8
A
127 145Right-handed alpha
Helix 9
AA9
A
161 171Right-handed alpha
Helix 10
AB1
A
182 188Right-handed alpha
Helix 11
AB2
A
191 200Right-handed alpha
Helix 12
AB3
A
212 222Right-handed alpha
Helix 13
AB4
A
225 233Right-handed alpha
Helix 14
AB5
A
246 257Right-handed alpha
Helix 15
AB6
A
275 294Right-handed alpha
Helix 16
AB7
B
8 11Right-handed 310
Helix 17
AB8
B
24 36Right-handed alpha
Helix 18
AB9
B
49 58Right-handed alpha
Helix 19
AC1
B
59 61Right-handed 310
Helix 20
AC2
B
77 95Right-handed alpha
Helix 21
AC3
B
116 120Right-handed 310
Helix 22
AC4
B
124 126Right-handed 310
Helix 23
AC5
B
127 144Right-handed alpha
Helix 24
AC6
B
161 171Right-handed alpha
Helix 25
AC7
B
182 188Right-handed alpha
Helix 26
AC8
B
191 200Right-handed alpha
Helix 27
AC9
B
212 223Right-handed alpha
Helix 28
AD1
B
225 233Right-handed alpha
Helix 29
AD2
B
246 257Right-handed alpha
Helix 30
AD3
B
275 294Right-handed alpha
Helix 31
AD4
C
8 11Right-handed 310
Helix 32
AD5
C
24 36Right-handed alpha
Helix 33
AD6
C
49 58Right-handed alpha
Helix 34
AD7
C
59 61Right-handed 310
Helix 35
AD8
C
77 96Right-handed alpha
Helix 36
AD9
C
116 120Right-handed 310
Helix 37
AE1
C
124 126Right-handed 310
Helix 38
AE2
C
127 145Right-handed alpha
Helix 39
AE3
C
161 171Right-handed alpha
Helix 40
AE4
C
182 188Right-handed alpha
Helix 41
AE5
C
191 200Right-handed alpha
Helix 42
AE6
C
212 223Right-handed alpha
Helix 43
AE7
C
225 233Right-handed alpha
Helix 44
AE8
C
246 257Right-handed alpha
Helix 45
AE9
C
275 294Right-handed alpha
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There are 6 sheets in PDB entry 9ZMW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
39 40parallel
Strand 3
A
2 6parallel
Strand 4
A
261 265parallel
Strand 5
A
203 207parallel
Strand 6
A
177 181parallel
Strand 7
A
148 152parallel
Strand 8
A
99 104parallel
Strand 9
A
68 71parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 211first strand
Strand 2
A
235 236anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 64first strand
Strand 2
B
39 40parallel
Strand 3
B
2 6parallel
Strand 4
B
261 265parallel
Strand 5
B
203 207parallel
Strand 6
B
177 181parallel
Strand 7
B
148 152parallel
Strand 8
B
99 104parallel
Strand 9
B
68 71parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
210 211first strand
Strand 2
B
235 236anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
63 64first strand
Strand 2
C
39 40parallel
Strand 3
C
2 6parallel
Strand 4
C
261 265parallel
Strand 5
C
203 207parallel
Strand 6
C
177 181parallel
Strand 7
C
148 152parallel
Strand 8
C
99 104parallel
Strand 9
C
68 71parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
210 211first strand
Strand 2
C
235 236anti-parallel
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