Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZO5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZO5 entry

There are 11 chains in PDB entry 9ZO5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLY 901
B	ASP 8	ARG 1116
C	VAL 1	ARG 388
D	GLY 3	THR 260
E	MET 3	GLU 187
F	MET 1	GLU 120
L	MET 1	LYS 94
H	GLU 6	GLU 81
N	MET 1	TYR 65
K	PHE 2	PRO 56
P	VAL 2	ILE 49

There are117 helices in PDB entry 9ZO5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	22	Right-handed alpha
Helix 2	AA2	A	45	49	Right-handed 310
Helix 3	AA3	A	82	84	Right-handed 310
Helix 4	AA4	A	85	96	Right-handed alpha
Helix 5	AA5	A	106	120	Right-handed alpha
Helix 6	AA6	A	123	141	Right-handed alpha
Helix 7	AA7	A	179	189	Right-handed alpha
Helix 8	AA8	A	193	198	Right-handed alpha
Helix 9	AA9	A	206	210	Right-handed 310
Helix 10	AB1	A	236	258	Right-handed alpha
Helix 11	AB2	A	261	281	Right-handed alpha
Helix 12	AB3	A	300	306	Right-handed alpha
Helix 13	AB4	A	343	350	Right-handed alpha
Helix 14	AB5	A	360	371	Right-handed alpha
Helix 15	AB6	A	395	400	Right-handed alpha
Helix 16	AB7	A	451	456	Right-handed alpha
Helix 17	AB8	A	471	481	Right-handed alpha
Helix 18	AB9	A	502	513	Right-handed alpha
Helix 19	AC1	A	520	531	Right-handed alpha
Helix 20	AC2	A	553	558	Right-handed alpha
Helix 21	AC3	A	576	588	Right-handed alpha
Helix 22	AC4	A	594	601	Right-handed alpha
Helix 23	AC5	A	629	662	Right-handed alpha
Helix 24	AC6	A	668	672	Right-handed 310
Helix 25	AC7	A	674	701	Right-handed alpha
Helix 26	AC8	A	711	739	Right-handed alpha
Helix 27	AC9	A	743	751	Right-handed alpha
Helix 28	AD1	A	756	765	Right-handed alpha
Helix 29	AD2	A	811	848	Right-handed alpha
Helix 30	AD3	A	870	873	Right-handed 310
Helix 31	AD4	A	887	901	Right-handed alpha
Helix 32	AD5	B	10	25	Right-handed alpha
Helix 33	AD6	B	28	51	Right-handed alpha
Helix 34	AD7	B	85	92	Right-handed alpha
Helix 35	AD8	B	108	111	Right-handed 310
Helix 36	AD9	B	138	144	Right-handed alpha
Helix 37	AE1	B	225	232	Right-handed alpha
Helix 38	AE2	B	236	244	Right-handed alpha
Helix 39	AE3	B	247	262	Right-handed alpha
Helix 40	AE4	B	269	278	Right-handed alpha
Helix 41	AE5	B	283	298	Right-handed alpha
Helix 42	AE6	B	306	308	Right-handed 310
Helix 43	AE7	B	309	329	Right-handed alpha
Helix 44	AE8	B	339	341	Right-handed 310
Helix 45	AE9	B	347	379	Right-handed alpha
Helix 46	AF1	B	379	386	Right-handed alpha
Helix 47	AF2	B	386	393	Right-handed alpha
Helix 48	AF3	B	397	409	Right-handed alpha
Helix 49	AF4	B	428	436	Right-handed alpha
Helix 50	AF5	B	449	454	Right-handed alpha
Helix 51	AF6	B	491	503	Right-handed alpha
Helix 52	AF7	B	531	545	Right-handed alpha
Helix 53	AF8	B	587	596	Right-handed alpha
Helix 54	AF9	B	600	607	Right-handed alpha
Helix 55	AG1	B	616	621	Right-handed 310
Helix 56	AG2	B	640	644	Right-handed 310
Helix 57	AG3	B	647	651	Right-handed 310
Helix 58	AG4	B	654	658	Right-handed 310
Helix 59	AG5	B	659	667	Right-handed alpha
Helix 60	AG6	B	667	672	Right-handed alpha
Helix 61	AG7	B	678	682	Right-handed 310
Helix 62	AG8	B	704	709	Right-handed alpha
Helix 63	AG9	B	739	743	Right-handed alpha
Helix 64	AH1	B	782	786	Right-handed 310
Helix 65	AH2	B	891	895	Right-handed 310
Helix 66	AH3	B	910	913	Right-handed 310
Helix 67	AH4	B	919	935	Right-handed alpha
Helix 68	AH5	B	947	959	Right-handed alpha
Helix 69	AH6	B	994	999	Right-handed alpha
Helix 70	AH7	B	1027	1037	Right-handed alpha
Helix 71	AH8	B	1040	1048	Right-handed alpha
Helix 72	AH9	B	1093	1105	Right-handed alpha
Helix 73	AI1	C	2	14	Right-handed alpha
Helix 74	AI2	C	18	37	Right-handed alpha
Helix 75	AI3	C	39	57	Right-handed alpha
Helix 76	AI4	C	64	80	Right-handed alpha
Helix 77	AI5	C	98	108	Right-handed alpha
Helix 78	AI6	C	128	138	Right-handed alpha
Helix 79	AI7	C	143	147	Right-handed alpha
Helix 80	AI8	C	168	173	Right-handed alpha
Helix 81	AI9	C	175	187	Right-handed alpha
Helix 82	AJ1	C	208	222	Right-handed alpha
Helix 83	AJ2	C	253	257	Right-handed 310
Helix 84	AJ3	C	269	278	Right-handed alpha
Helix 85	AJ4	C	278	298	Right-handed alpha
Helix 86	AJ5	C	302	314	Right-handed alpha
Helix 87	AJ6	C	326	331	Right-handed alpha
Helix 88	AJ7	C	333	339	Right-handed alpha
Helix 89	AJ8	C	344	354	Right-handed alpha
Helix 90	AJ9	C	362	369	Right-handed alpha
Helix 91	AK1	D	24	36	Right-handed alpha
Helix 92	AK2	D	57	67	Right-handed alpha
Helix 93	AK3	D	104	106	Right-handed 310
Helix 94	AK4	D	145	149	Right-handed 310
Helix 95	AK5	D	169	180	Right-handed alpha
Helix 96	AK6	D	202	206	Right-handed 310
Helix 97	AK7	D	233	258	Right-handed alpha
Helix 98	AK8	E	24	36	Right-handed alpha
Helix 99	AK9	E	111	115	Right-handed 310
Helix 100	AL1	E	174	187	Right-handed alpha
Helix 101	AL2	F	13	30	Right-handed alpha
Helix 102	AL3	F	38	51	Right-handed alpha
Helix 103	AL4	F	55	70	Right-handed alpha
Helix 104	AL5	F	74	85	Right-handed alpha
Helix 105	AL6	F	88	94	Right-handed alpha
Helix 106	AL7	F	104	117	Right-handed alpha
Helix 107	AL8	L	21	34	Right-handed alpha
Helix 108	AL9	L	66	94	Right-handed alpha
Helix 109	AM1	H	22	34	Right-handed alpha
Helix 110	AM2	H	36	40	Right-handed 310
Helix 111	AM3	H	47	53	Right-handed alpha
Helix 112	AM4	N	16	28	Right-handed alpha
Helix 113	AM5	N	30	39	Right-handed alpha
Helix 114	AM6	N	45	52	Right-handed alpha
Helix 115	AM7	N	55	60	Right-handed alpha
Helix 116	AM8	K	5	23	Right-handed alpha
Helix 117	AM9	K	35	47	Right-handed alpha

There are 39 sheets in PDB entry 9ZO5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	7	first strand
Strand 2	B	1112	1114	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	12	first strand
Strand 2	B	1107	1109	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	72	80	first strand
Strand 2	A	212	217	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	165	167	first strand
Strand 2	A	173	175	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	464	467	first strand
Strand 2	A	324	327	anti-parallel
Strand 3	B	1000	1002	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	329	331	first strand
Strand 2	A	445	447	parallel
Strand 3	A	339	342	anti-parallel
Strand 4	A	433	439	parallel
Strand 5	A	418	421	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	355	first strand
Strand 2	A	408	411	anti-parallel
Strand 3	A	378	382	anti-parallel
Strand 4	A	388	390	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	517	519	first strand
Strand 2	A	550	552	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	566	570	first strand
Strand 2	A	606	610	anti-parallel
Strand 3	A	613	616	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	771	772	first strand
Strand 2	A	775	776	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	851	852	first strand
Strand 2	A	857	859	anti-parallel
Strand 3	A	865	868	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	53	first strand
Strand 2	B	62	69	anti-parallel
Strand 3	B	97	106	anti-parallel
Strand 4	B	116	124	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	75	first strand
Strand 2	B	81	83	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	156	158	first strand
Strand 2	B	161	165	anti-parallel
Strand 3	B	421	423	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	343	346	first strand
Strand 2	B	167	171	anti-parallel
Strand 3	B	438	440	parallel
Strand 4	B	478	479	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	180	first strand
Strand 2	B	187	191	anti-parallel
Strand 3	B	203	206	anti-parallel
Strand 4	B	212	214	anti-parallel
Strand 5	B	223	224	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	193	195	first strand
Strand 2	B	198	200	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	485	486	first strand
Strand 2	B	572	580	anti-parallel
Strand 3	B	610	613	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	583	584	first strand
Strand 2	B	572	580	anti-parallel
Strand 3	B	636	638	anti-parallel
Strand 4	B	623	624	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	505	506	first strand
Strand 2	B	524	529	anti-parallel
Strand 3	B	517	521	anti-parallel
Strand 4	B	562	566	parallel
Strand 5	B	553	557	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	688	692	first strand
Strand 2	B	749	758	anti-parallel
Strand 3	B	858	868	anti-parallel
Strand 4	B	844	852	anti-parallel
Strand 5	P	35	36	anti-parallel
Strand 6	P	4	8	anti-parallel
Strand 7	P	14	17	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	700	701	first strand
Strand 2	B	938	939	parallel

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There are 8 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	965	966	first strand
Strand 2	B	981	990	anti-parallel
Strand 3	B	875	878	anti-parallel
Strand 4	B	883	890	anti-parallel
Strand 5	B	735	738	parallel
Strand 6	B	906	908	anti-parallel
Strand 7	B	717	722	parallel
Strand 8	B	981	990	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	769	770	first strand
Strand 2	B	810	812	anti-parallel
Strand 3	B	831	832	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	897	898	first strand
Strand 2	B	968	969	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1053	1057	first strand
Strand 2	B	1088	1092	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1067	1069	first strand
Strand 2	B	1074	1076	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	119	first strand
Strand 2	C	244	247	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	148	150	first strand
Strand 2	C	163	164	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	191	195	first strand
Strand 2	C	198	202	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	380	382	first strand
Strand 2	K	52	54	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	8	first strand
Strand 2	D	15	21	anti-parallel
Strand 3	D	215	228	anti-parallel
Strand 4	D	151	164	anti-parallel
Strand 5	D	190	194	anti-parallel
Strand 6	D	184	186	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	107	108	first strand
Strand 2	D	89	95	anti-parallel
Strand 3	D	131	140	anti-parallel
Strand 4	D	41	52	anti-parallel
Strand 5	P	44	47	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	99	102	first strand
Strand 2	D	121	125	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	40	41	first strand
Strand 2	E	45	56	anti-parallel
Strand 3	E	68	79	anti-parallel
Strand 4	E	4	15	anti-parallel
Strand 5	F	5	10	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	85	87	first strand
Strand 2	E	146	152	anti-parallel
Strand 3	E	162	166	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	90	95	first strand
Strand 2	E	98	102	anti-parallel
Strand 3	E	107	109	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	2	9	first strand
Strand 2	L	12	18	anti-parallel
Strand 3	L	56	61	anti-parallel
Strand 4	L	38	44	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	18	20	first strand
Strand 2	H	60	64	anti-parallel
Strand 3	H	74	79	anti-parallel
Strand 4	H	42	43	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZO5

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZO5