Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZOG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZOG entry

There are 6 chains in PDB entry 9ZOG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 18	GLU 173
B	MET 25	GLU 173
C	MET 25	GLU 173
D	MET 25	GLU 173
E	HIS 24	GLU 173
F	MET 25	GLU 173

There are 72 helices in PDB entry 9ZOG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	40	Right-handed alpha
Helix 2	AA2	A	42	52	Right-handed alpha
Helix 3	AA3	A	66	74	Right-handed alpha
Helix 4	AA4	A	75	78	Right-handed 310
Helix 5	AA5	A	82	91	Right-handed alpha
Helix 6	AA6	A	103	113	Right-handed alpha
Helix 7	AA7	A	116	120	Right-handed 310
Helix 8	AA8	A	124	130	Right-handed alpha
Helix 9	AA9	A	132	136	Right-handed 310
Helix 10	AB1	A	143	155	Right-handed alpha
Helix 11	AB2	A	156	160	Right-handed 310
Helix 12	AB3	A	167	172	Right-handed alpha
Helix 13	AB4	B	34	40	Right-handed alpha
Helix 14	AB5	B	42	52	Right-handed alpha
Helix 15	AB6	B	66	74	Right-handed alpha
Helix 16	AB7	B	75	78	Right-handed 310
Helix 17	AB8	B	82	91	Right-handed alpha
Helix 18	AB9	B	103	113	Right-handed alpha
Helix 19	AC1	B	116	120	Right-handed 310
Helix 20	AC2	B	124	130	Right-handed alpha
Helix 21	AC3	B	132	136	Right-handed 310
Helix 22	AC4	B	143	155	Right-handed alpha
Helix 23	AC5	B	156	160	Right-handed 310
Helix 24	AC6	B	167	172	Right-handed alpha
Helix 25	AC7	C	34	40	Right-handed alpha
Helix 26	AC8	C	42	52	Right-handed alpha
Helix 27	AC9	C	66	74	Right-handed alpha
Helix 28	AD1	C	75	78	Right-handed 310
Helix 29	AD2	C	82	91	Right-handed alpha
Helix 30	AD3	C	103	113	Right-handed alpha
Helix 31	AD4	C	116	120	Right-handed 310
Helix 32	AD5	C	124	130	Right-handed alpha
Helix 33	AD6	C	132	136	Right-handed 310
Helix 34	AD7	C	143	155	Right-handed alpha
Helix 35	AD8	C	156	160	Right-handed 310
Helix 36	AD9	C	167	172	Right-handed alpha
Helix 37	AE1	D	34	40	Right-handed alpha
Helix 38	AE2	D	42	52	Right-handed alpha
Helix 39	AE3	D	66	74	Right-handed alpha
Helix 40	AE4	D	75	78	Right-handed 310
Helix 41	AE5	D	82	91	Right-handed alpha
Helix 42	AE6	D	103	113	Right-handed alpha
Helix 43	AE7	D	116	120	Right-handed 310
Helix 44	AE8	D	124	130	Right-handed alpha
Helix 45	AE9	D	132	136	Right-handed 310
Helix 46	AF1	D	143	155	Right-handed alpha
Helix 47	AF2	D	156	160	Right-handed 310
Helix 48	AF3	D	167	172	Right-handed alpha
Helix 49	AF4	E	34	40	Right-handed alpha
Helix 50	AF5	E	42	52	Right-handed alpha
Helix 51	AF6	E	66	74	Right-handed alpha
Helix 52	AF7	E	75	78	Right-handed 310
Helix 53	AF8	E	82	91	Right-handed alpha
Helix 54	AF9	E	103	113	Right-handed alpha
Helix 55	AG1	E	116	120	Right-handed 310
Helix 56	AG2	E	124	130	Right-handed alpha
Helix 57	AG3	E	132	136	Right-handed 310
Helix 58	AG4	E	143	155	Right-handed alpha
Helix 59	AG5	E	156	160	Right-handed 310
Helix 60	AG6	E	167	172	Right-handed alpha
Helix 61	AG7	F	34	40	Right-handed alpha
Helix 62	AG8	F	42	52	Right-handed alpha
Helix 63	AG9	F	66	74	Right-handed alpha
Helix 64	AH1	F	75	78	Right-handed 310
Helix 65	AH2	F	82	91	Right-handed alpha
Helix 66	AH3	F	103	113	Right-handed alpha
Helix 67	AH4	F	116	120	Right-handed 310
Helix 68	AH5	F	124	130	Right-handed alpha
Helix 69	AH6	F	132	136	Right-handed 310
Helix 70	AH7	F	143	155	Right-handed alpha
Helix 71	AH8	F	156	160	Right-handed 310
Helix 72	AH9	F	167	172	Right-handed alpha

There are 6 sheets in PDB entry 9ZOG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	64	first strand
Strand 2	A	93	101	anti-parallel
Strand 3	A	27	33	anti-parallel
Strand 4	A	138	140	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	64	first strand
Strand 2	B	93	101	anti-parallel
Strand 3	B	27	33	anti-parallel
Strand 4	B	138	140	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	64	first strand
Strand 2	C	93	101	anti-parallel
Strand 3	C	27	33	anti-parallel
Strand 4	C	138	140	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	64	first strand
Strand 2	D	93	101	anti-parallel
Strand 3	D	27	33	anti-parallel
Strand 4	D	138	140	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	64	first strand
Strand 2	E	93	101	anti-parallel
Strand 3	E	27	33	anti-parallel
Strand 4	E	138	140	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	64	first strand
Strand 2	F	93	101	anti-parallel
Strand 3	F	27	33	anti-parallel
Strand 4	F	138	140	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZOG

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZOG