Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZPG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZPG entry

There are 2 chains in PDB entry 9ZPG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 498
B
 THR 2LEU 497
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 9ZPG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 35Right-handed alpha
Helix 2
AA2
A
54 66Right-handed alpha
Helix 3
AA3
A
84 87Right-handed 310
Helix 4
AA4
A
88 102Right-handed alpha
Helix 5
AA5
A
111 126Right-handed alpha
Helix 6
AA6
A
139 149Right-handed alpha
Helix 7
AA7
A
180 182Right-handed 310
Helix 8
AA8
A
195 207Right-handed alpha
Helix 9
AA9
A
217 220Right-handed 310
Helix 10
AB1
A
221 233Right-handed alpha
Helix 11
AB2
A
261 269Right-handed alpha
Helix 12
AB3
A
271 284Right-handed alpha
Helix 13
AB4
A
294 301Right-handed alpha
Helix 14
AB5
A
303 307Right-handed 310
Helix 15
AB6
A
315 330Right-handed alpha
Helix 16
AB7
A
331 343Right-handed alpha
Helix 17
AB8
A
345 357Right-handed alpha
Helix 18
AB9
A
362 364Right-handed 310
Helix 19
AC1
A
365 371Right-handed alpha
Helix 20
AC2
A
372 375Right-handed 310
Helix 21
AC3
A
381 386Right-handed 310
Helix 22
AC4
A
391 408Right-handed alpha
Helix 23
AC5
A
413 429Right-handed alpha
Helix 24
AC6
A
431 445Right-handed alpha
Helix 25
AC7
A
451 460Right-handed alpha
Helix 26
AC8
A
460 475Right-handed alpha
Helix 27
AC9
A
479 492Right-handed alpha
Helix 28
AD1
B
18 34Right-handed alpha
Helix 29
AD2
B
53 67Right-handed alpha
Helix 30
AD3
B
84 87Right-handed 310
Helix 31
AD4
B
88 102Right-handed alpha
Helix 32
AD5
B
111 126Right-handed alpha
Helix 33
AD6
B
139 149Right-handed alpha
Helix 34
AD7
B
180 182Right-handed 310
Helix 35
AD8
B
195 207Right-handed alpha
Helix 36
AD9
B
217 220Right-handed 310
Helix 37
AE1
B
221 233Right-handed alpha
Helix 38
AE2
B
261 268Right-handed alpha
Helix 39
AE3
B
271 284Right-handed alpha
Helix 40
AE4
B
294 301Right-handed alpha
Helix 41
AE5
B
303 307Right-handed 310
Helix 42
AE6
B
315 329Right-handed alpha
Helix 43
AE7
B
331 343Right-handed alpha
Helix 44
AE8
B
345 357Right-handed alpha
Helix 45
AE9
B
358 360Right-handed 310
Helix 46
AF1
B
362 364Right-handed 310
Helix 47
AF2
B
365 371Right-handed alpha
Helix 48
AF3
B
372 375Right-handed 310
Helix 49
AF4
B
391 408Right-handed alpha
Helix 50
AF5
B
413 427Right-handed alpha
Helix 51
AF6
B
431 445Right-handed alpha
Helix 52
AF7
B
451 475Right-handed alpha
Helix 53
AF8
B
479 493Right-handed alpha
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There are 8 sheets in PDB entry 9ZPG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
38 41parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 108first strand
Strand 2
A
154 157anti-parallel
Strand 3
A
186 188anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 169first strand
Strand 2
A
173 178anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 215first strand
Strand 2
A
238 242parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 9first strand
Strand 2
B
38 41parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 108first strand
Strand 2
B
154 157anti-parallel
Strand 3
B
186 188anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 169first strand
Strand 2
B
173 178anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 215first strand
Strand 2
B
238 242parallel
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