Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZPK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZPK entry

There are 12 chains in PDB entry 9ZPK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 2	MET 1454
B	ASP 20	ASP 1223
C	GLU 4	ASP 268
D	ARG 14	TYR 221
E	ASP 2	MET 215
F	LEU 69	LEU 155
G	MET 1	ILE 171
H	MET 1	ARG 146
I	THR 2	LYS 115
J	MET 1	LEU 66
K	MET 1	ALA 115
L	LEU 27	ARG 70

There are128 helices in PDB entry 9ZPK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	31	Right-handed alpha
Helix 2	AA2	A	96	105	Right-handed alpha
Helix 3	AA3	A	120	128	Right-handed alpha
Helix 4	AA4	A	132	142	Right-handed alpha
Helix 5	AA5	A	191	195	Right-handed 310
Helix 6	AA6	A	203	214	Right-handed alpha
Helix 7	AA7	A	215	223	Right-handed alpha
Helix 8	AA8	A	230	234	Right-handed 310
Helix 9	AA9	A	243	247	Right-handed 310
Helix 10	AB1	A	260	282	Right-handed alpha
Helix 11	AB2	A	288	305	Right-handed alpha
Helix 12	AB3	A	324	329	Right-handed alpha
Helix 13	AB4	A	368	374	Right-handed alpha
Helix 14	AB5	A	384	395	Right-handed alpha
Helix 15	AB6	A	420	424	Right-handed 310
Helix 16	AB7	A	474	479	Right-handed alpha
Helix 17	AB8	A	494	502	Right-handed alpha
Helix 18	AB9	A	524	535	Right-handed alpha
Helix 19	AC1	A	542	553	Right-handed alpha
Helix 20	AC2	A	573	579	Right-handed alpha
Helix 21	AC3	A	580	582	Right-handed 310
Helix 22	AC4	A	618	623	Right-handed alpha
Helix 23	AC5	A	628	637	Right-handed alpha
Helix 24	AC6	A	640	661	Right-handed alpha
Helix 25	AC7	A	665	669	Right-handed 310
Helix 26	AC8	A	672	699	Right-handed alpha
Helix 27	AC9	A	709	737	Right-handed alpha
Helix 28	AD1	A	741	749	Right-handed alpha
Helix 29	AD2	A	754	763	Right-handed alpha
Helix 30	AD3	A	809	843	Right-handed alpha
Helix 31	AD4	A	867	871	Right-handed 310
Helix 32	AD5	A	889	898	Right-handed alpha
Helix 33	AD6	A	909	913	Right-handed 310
Helix 34	AD7	A	922	947	Right-handed alpha
Helix 35	AD8	A	959	970	Right-handed alpha
Helix 36	AD9	A	982	997	Right-handed alpha
Helix 37	AE1	A	1004	1014	Right-handed alpha
Helix 38	AE2	A	1015	1026	Right-handed alpha
Helix 39	AE3	A	1027	1034	Right-handed alpha
Helix 40	AE4	A	1038	1057	Right-handed alpha
Helix 41	AE5	A	1063	1074	Right-handed alpha
Helix 42	AE6	A	1075	1077	Right-handed 310
Helix 43	AE7	A	1096	1106	Right-handed alpha
Helix 44	AE8	A	1127	1139	Right-handed alpha
Helix 45	AE9	A	1167	1174	Right-handed alpha
Helix 46	AF1	A	1198	1205	Right-handed alpha
Helix 47	AF2	A	1208	1220	Right-handed alpha
Helix 48	AF3	A	1255	1270	Right-handed alpha
Helix 49	AF4	A	1312	1317	Right-handed alpha
Helix 50	AF5	A	1331	1339	Right-handed alpha
Helix 51	AF6	A	1340	1359	Right-handed alpha
Helix 52	AF7	A	1364	1377	Right-handed alpha
Helix 53	AF8	A	1395	1401	Right-handed alpha
Helix 54	AF9	A	1406	1416	Right-handed alpha
Helix 55	AG1	A	1423	1431	Right-handed alpha
Helix 56	AG2	A	1436	1440	Right-handed 310
Helix 57	AG3	A	1447	1453	Right-handed alpha
Helix 58	AG4	B	26	28	Right-handed 310
Helix 59	AG5	B	29	42	Right-handed alpha
Helix 60	AG6	B	44	57	Right-handed alpha
Helix 61	AG7	B	58	66	Right-handed alpha
Helix 62	AG8	B	113	121	Right-handed alpha
Helix 63	AG9	B	179	184	Right-handed 310
Helix 64	AH1	B	185	192	Right-handed alpha
Helix 65	AH2	B	246	250	Right-handed 310
Helix 66	AH3	B	282	290	Right-handed alpha
Helix 67	AH4	B	293	302	Right-handed alpha
Helix 68	AH5	B	308	321	Right-handed alpha
Helix 69	AH6	B	326	333	Right-handed alpha
Helix 70	AH7	B	348	359	Right-handed alpha
Helix 71	AH8	B	370	390	Right-handed alpha
Helix 72	AH9	B	400	402	Right-handed 310
Helix 73	AI1	B	408	430	Right-handed alpha
Helix 74	AI2	B	444	464	Right-handed alpha
Helix 75	AI3	B	487	496	Right-handed alpha
Helix 76	AI4	B	515	519	Right-handed 310
Helix 77	AI5	B	551	561	Right-handed alpha
Helix 78	AI6	B	592	606	Right-handed alpha
Helix 79	AI7	B	654	668	Right-handed alpha
Helix 80	AI8	B	680	688	Right-handed alpha
Helix 81	AI9	B	744	749	Right-handed 310
Helix 82	AJ1	B	752	756	Right-handed 310
Helix 83	AJ2	B	763	775	Right-handed alpha
Helix 84	AJ3	B	806	811	Right-handed 310
Helix 85	AJ4	B	843	848	Right-handed alpha
Helix 86	AJ5	B	889	893	Right-handed 310
Helix 87	AJ6	B	1014	1017	Right-handed 310
Helix 88	AJ7	B	1022	1039	Right-handed alpha
Helix 89	AJ8	B	1051	1063	Right-handed alpha
Helix 90	AJ9	B	1098	1102	Right-handed 310
Helix 91	AK1	B	1131	1142	Right-handed alpha
Helix 92	AK2	B	1143	1153	Right-handed alpha
Helix 93	AK3	B	1197	1210	Right-handed alpha
Helix 94	AK4	C	26	39	Right-handed alpha
Helix 95	AK5	C	59	68	Right-handed alpha
Helix 96	AK6	C	76	80	Right-handed 310
Helix 97	AK7	C	82	86	Right-handed 310
Helix 98	AK8	C	167	171	Right-handed 310
Helix 99	AK9	C	196	201	Right-handed alpha
Helix 100	AL1	C	239	266	Right-handed alpha
Helix 101	AL2	D	51	75	Right-handed alpha
Helix 102	AL3	D	119	134	Right-handed alpha
Helix 103	AL4	D	138	151	Right-handed alpha
Helix 104	AL5	D	163	168	Right-handed alpha
Helix 105	AL6	D	174	179	Right-handed alpha
Helix 106	AL7	D	206	216	Right-handed alpha
Helix 107	AL8	E	4	26	Right-handed alpha
Helix 108	AL9	E	31	36	Right-handed alpha
Helix 109	AM1	E	38	46	Right-handed alpha
Helix 110	AM2	E	65	72	Right-handed alpha
Helix 111	AM3	E	89	104	Right-handed alpha
Helix 112	AM4	E	117	122	Right-handed alpha
Helix 113	AM5	E	157	169	Right-handed alpha
Helix 114	AM6	E	182	189	Right-handed alpha
Helix 115	AM7	F	86	103	Right-handed alpha
Helix 116	AM8	F	116	128	Right-handed alpha
Helix 117	AM9	G	14	18	Right-handed 310
Helix 118	AN1	G	19	20	Right-handed 310
Helix 119	AN2	G	21	35	Right-handed alpha
Helix 120	AN3	G	50	54	Right-handed 310
Helix 121	AN4	I	61	65	Right-handed 310
Helix 122	AN5	J	17	28	Right-handed alpha
Helix 123	AN6	J	31	40	Right-handed alpha
Helix 124	AN7	J	43	52	Right-handed alpha
Helix 125	AN8	J	56	62	Right-handed alpha
Helix 126	AN9	K	5	9	Right-handed 310
Helix 127	AO1	K	39	52	Right-handed alpha
Helix 128	AO2	K	82	112	Right-handed alpha

There are 46 sheets in PDB entry 9ZPK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1418	1419	first strand
Strand 2	A	16	18	anti-parallel
Strand 3	B	1215	1217	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	83	first strand
Strand 2	A	240	241	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	107	first strand
Strand 2	A	112	113	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	177	first strand
Strand 2	A	180	182	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	343	345	first strand
Strand 2	B	1128	1130	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	443	445	first strand
Strand 2	A	486	490	anti-parallel
Strand 3	A	348	355	anti-parallel
Strand 4	A	468	470	parallel
Strand 5	A	363	367	anti-parallel
Strand 6	A	459	463	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	443	445	first strand
Strand 2	A	486	490	anti-parallel
Strand 3	A	348	355	anti-parallel
Strand 4	B	1104	1106	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	379	first strand
Strand 2	A	431	435	anti-parallel
Strand 3	A	402	406	anti-parallel
Strand 4	A	412	414	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	512	513	first strand
Strand 2	A	518	519	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	588	589	first strand
Strand 2	A	606	608	anti-parallel
Strand 3	A	611	614	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	766	767	first strand
Strand 2	A	799	800	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	849	850	first strand
Strand 2	A	856	857	anti-parallel
Strand 3	A	863	865	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	879	882	first strand
Strand 2	A	953	956	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1117	1119	first strand
Strand 2	A	1298	1307	anti-parallel
Strand 3	A	1283	1292	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1224	1228	first strand
Strand 2	A	1236	1242	anti-parallel
Strand 3	A	1191	1197	anti-parallel
Strand 4	A	1147	1154	anti-parallel
Strand 5	I	44	45	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1444	1445	first strand
Strand 2	G	59	61	anti-parallel
Strand 3	G	68	69	anti-parallel
Strand 4	G	12	13	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	70	first strand
Strand 2	B	89	103	anti-parallel
Strand 3	B	109	111	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	70	first strand
Strand 2	B	89	103	anti-parallel
Strand 3	B	125	133	anti-parallel
Strand 4	B	165	171	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	205	first strand
Strand 2	B	208	212	anti-parallel
Strand 3	B	480	482	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	215	218	first strand
Strand 2	B	404	407	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	226	227	first strand
Strand 2	B	234	240	anti-parallel
Strand 3	B	254	259	anti-parallel
Strand 4	B	268	273	anti-parallel
Strand 5	B	276	281	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	497	499	first strand
Strand 2	B	536	538	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	544	545	first strand
Strand 2	B	633	641	anti-parallel
Strand 3	B	690	694	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	650	651	first strand
Strand 2	B	633	641	anti-parallel
Strand 3	B	740	741	anti-parallel
Strand 4	B	703	704	parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	564	565	first strand
Strand 2	B	585	590	anti-parallel
Strand 3	B	578	582	anti-parallel
Strand 4	B	625	627	parallel
Strand 5	B	614	615	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	804	805	first strand
Strand 2	B	1042	1043	parallel

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There are 8 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1069	1070	first strand
Strand 2	B	1085	1094	anti-parallel
Strand 3	B	979	981	anti-parallel
Strand 4	B	987	994	anti-parallel
Strand 5	B	839	842	parallel
Strand 6	B	1010	1012	anti-parallel
Strand 7	B	821	827	parallel
Strand 8	B	1085	1094	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	856	861	first strand
Strand 2	B	963	969	anti-parallel
Strand 3	B	947	955	anti-parallel
Strand 4	B	904	905	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	873	874	first strand
Strand 2	B	914	915	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	910	912	first strand
Strand 2	B	939	940	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1001	1002	first strand
Strand 2	B	1072	1073	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1158	1163	first strand
Strand 2	B	1191	1196	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	13	first strand
Strand 2	C	17	22	anti-parallel
Strand 3	C	228	233	anti-parallel
Strand 4	C	175	176	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	120	first strand
Strand 2	C	97	104	anti-parallel
Strand 3	C	152	160	anti-parallel
Strand 4	C	45	54	anti-parallel
Strand 5	L	65	68	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	72	74	first strand
Strand 2	C	129	132	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	113	first strand
Strand 2	C	145	147	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	38	first strand
Strand 2	D	44	46	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	61	62	first strand
Strand 2	E	78	82	anti-parallel
Strand 3	E	107	112	parallel
Strand 4	E	131	136	parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	152	155	first strand
Strand 2	E	195	200	anti-parallel
Strand 3	E	208	214	anti-parallel
Strand 4	E	177	178	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	133	134	first strand
Strand 2	F	146	147	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	2	9	first strand
Strand 2	G	72	79	anti-parallel
Strand 3	G	44	49	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	100	102	first strand
Strand 2	G	85	93	anti-parallel
Strand 3	G	143	147	anti-parallel

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There are 8 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	16	first strand
Strand 2	H	23	30	anti-parallel
Strand 3	H	37	43	anti-parallel
Strand 4	H	121	125	anti-parallel
Strand 5	H	111	118	anti-parallel
Strand 6	H	97	107	anti-parallel
Strand 7	H	140	144	anti-parallel
Strand 8	H	57	58	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	15	19	first strand
Strand 2	I	24	28	anti-parallel
Strand 3	I	35	37	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	84	87	first strand
Strand 2	I	99	102	anti-parallel
Strand 3	I	109	111	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	19	24	first strand
Strand 2	K	30	36	anti-parallel
Strand 3	K	70	77	anti-parallel
Strand 4	K	56	63	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZPK

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZPK