Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZPZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZPZ entry

There are 4 chains in PDB entry 9ZPZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 156	MET 604
B	VAL 156	MET 604
C	VAL 156	MET 604
D	VAL 156	MET 604

There are 82 helices in PDB entry 9ZPZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	162	189	Right-handed alpha
Helix 2	AA2	A	189	196	Right-handed alpha
Helix 3	AA3	A	196	220	Right-handed alpha
Helix 4	AA4	A	234	242	Right-handed alpha
Helix 5	AA5	A	243	254	Right-handed alpha
Helix 6	AA6	A	255	258	Right-handed 310
Helix 7	AA7	A	259	264	Right-handed alpha
Helix 8	AA8	A	267	276	Right-handed 310
Helix 9	AA9	A	277	292	Right-handed alpha
Helix 10	AB1	A	294	326	Right-handed alpha
Helix 11	AB2	A	344	361	Right-handed alpha
Helix 12	AB3	A	371	404	Right-handed alpha
Helix 13	AB4	A	404	424	Right-handed alpha
Helix 14	AB5	A	427	444	Right-handed alpha
Helix 15	AB6	A	449	456	Right-handed alpha
Helix 16	AB7	A	458	475	Right-handed alpha
Helix 17	AB8	A	485	494	Right-handed alpha
Helix 18	AB9	A	545	550	Right-handed alpha
Helix 19	AC1	A	578	586	Right-handed alpha
Helix 20	AC2	A	588	604	Right-handed alpha
Helix 21	AC3	B	162	189	Right-handed alpha
Helix 22	AC4	B	189	196	Right-handed alpha
Helix 23	AC5	B	196	220	Right-handed alpha
Helix 24	AC6	B	232	242	Right-handed alpha
Helix 25	AC7	B	243	253	Right-handed alpha
Helix 26	AC8	B	255	258	Right-handed 310
Helix 27	AC9	B	259	264	Right-handed alpha
Helix 28	AD1	B	267	276	Right-handed 310
Helix 29	AD2	B	277	292	Right-handed alpha
Helix 30	AD3	B	294	326	Right-handed alpha
Helix 31	AD4	B	344	361	Right-handed alpha
Helix 32	AD5	B	371	404	Right-handed alpha
Helix 33	AD6	B	404	424	Right-handed alpha
Helix 34	AD7	B	427	444	Right-handed alpha
Helix 35	AD8	B	449	456	Right-handed alpha
Helix 36	AD9	B	458	476	Right-handed alpha
Helix 37	AE1	B	484	493	Right-handed alpha
Helix 38	AE2	B	578	586	Right-handed alpha
Helix 39	AE3	B	590	602	Right-handed alpha
Helix 40	AE4	C	162	189	Right-handed alpha
Helix 41	AE5	C	189	196	Right-handed alpha
Helix 42	AE6	C	196	220	Right-handed alpha
Helix 43	AE7	C	232	242	Right-handed alpha
Helix 44	AE8	C	243	254	Right-handed alpha
Helix 45	AE9	C	255	257	Right-handed 310
Helix 46	AF1	C	258	263	Right-handed alpha
Helix 47	AF2	C	267	276	Right-handed 310
Helix 48	AF3	C	277	292	Right-handed alpha
Helix 49	AF4	C	294	326	Right-handed alpha
Helix 50	AF5	C	344	361	Right-handed alpha
Helix 51	AF6	C	371	404	Right-handed alpha
Helix 52	AF7	C	404	424	Right-handed alpha
Helix 53	AF8	C	427	444	Right-handed alpha
Helix 54	AF9	C	449	455	Right-handed alpha
Helix 55	AG1	C	458	477	Right-handed alpha
Helix 56	AG2	C	486	493	Right-handed alpha
Helix 57	AG3	C	545	550	Right-handed alpha
Helix 58	AG4	C	578	587	Right-handed alpha
Helix 59	AG5	C	588	590	Right-handed 310
Helix 60	AG6	C	591	598	Right-handed alpha
Helix 61	AG7	C	599	604	Right-handed alpha
Helix 62	AG8	D	162	189	Right-handed alpha
Helix 63	AG9	D	189	196	Right-handed alpha
Helix 64	AH1	D	196	220	Right-handed alpha
Helix 65	AH2	D	232	242	Right-handed alpha
Helix 66	AH3	D	243	253	Right-handed alpha
Helix 67	AH4	D	255	257	Right-handed 310
Helix 68	AH5	D	258	264	Right-handed alpha
Helix 69	AH6	D	267	276	Right-handed 310
Helix 70	AH7	D	277	290	Right-handed alpha
Helix 71	AH8	D	294	326	Right-handed alpha
Helix 72	AH9	D	344	361	Right-handed alpha
Helix 73	AI1	D	371	404	Right-handed alpha
Helix 74	AI2	D	404	424	Right-handed alpha
Helix 75	AI3	D	427	444	Right-handed alpha
Helix 76	AI4	D	449	455	Right-handed alpha
Helix 77	AI5	D	458	476	Right-handed alpha
Helix 78	AI6	D	477	482	Right-handed alpha
Helix 79	AI7	D	484	494	Right-handed alpha
Helix 80	AI8	D	578	587	Right-handed alpha
Helix 81	AI9	D	588	590	Right-handed 310
Helix 82	AJ1	D	591	603	Right-handed alpha

There are 12 sheets in PDB entry 9ZPZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	225	first strand
Strand 2	A	228	229	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	496	500	first strand
Strand 2	A	571	577	anti-parallel
Strand 3	A	515	521	anti-parallel
Strand 4	A	543	544	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	505	507	first strand
Strand 2	A	564	567	anti-parallel
Strand 3	A	524	527	anti-parallel
Strand 4	A	534	538	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	225	first strand
Strand 2	B	228	229	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	496	500	first strand
Strand 2	B	571	577	anti-parallel
Strand 3	B	515	521	anti-parallel
Strand 4	B	543	544	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	505	507	first strand
Strand 2	B	564	567	anti-parallel
Strand 3	B	524	527	anti-parallel
Strand 4	B	534	538	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	224	225	first strand
Strand 2	C	228	229	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	498	first strand
Strand 2	C	573	577	anti-parallel
Strand 3	C	515	519	anti-parallel
Strand 4	C	543	544	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	505	507	first strand
Strand 2	C	564	567	anti-parallel
Strand 3	C	524	527	anti-parallel
Strand 4	C	534	538	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	224	225	first strand
Strand 2	D	228	229	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	496	500	first strand
Strand 2	D	571	577	anti-parallel
Strand 3	D	515	521	anti-parallel
Strand 4	D	543	544	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	505	507	first strand
Strand 2	D	564	567	anti-parallel
Strand 3	D	524	527	anti-parallel
Strand 4	D	534	538	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZPZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZPZ