Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZQU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZQU entry

There are 6 chains in PDB entry 9ZQU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 63ALA 553
B
 ASP 63ALA 553
C
 ASP 63ALA 553
D
 ASP 63ALA 553
E
 ASP 63ALA 553
F
 ASP 63ALA 553
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are120 helices in PDB entry 9ZQU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 89Right-handed alpha
Helix 2
AA2
A
94 110Right-handed alpha
Helix 3
AA3
A
157 175Right-handed alpha
Helix 4
AA4
A
189 193Right-handed 310
Helix 5
AA5
A
194 212Right-handed alpha
Helix 6
AA6
A
229 244Right-handed alpha
Helix 7
AA7
A
250 254Right-handed 310
Helix 8
AA8
A
259 263Right-handed 310
Helix 9
AA9
A
270 285Right-handed alpha
Helix 10
AB1
A
286 294Right-handed alpha
Helix 11
AB2
A
310 323Right-handed alpha
Helix 12
AB3
A
344 356Right-handed alpha
Helix 13
AB4
A
370 374Right-handed 310
Helix 14
AB5
A
410 420Right-handed alpha
Helix 15
AB6
A
426 431Right-handed alpha
Helix 16
AB7
A
432 448Right-handed alpha
Helix 17
AB8
A
455 479Right-handed alpha
Helix 18
AB9
A
490 496Right-handed alpha
Helix 19
AC1
A
501 528Right-handed alpha
Helix 20
AC2
A
533 553Right-handed alpha
Helix 21
AC3
B
65 89Right-handed alpha
Helix 22
AC4
B
94 110Right-handed alpha
Helix 23
AC5
B
157 175Right-handed alpha
Helix 24
AC6
B
189 193Right-handed 310
Helix 25
AC7
B
194 212Right-handed alpha
Helix 26
AC8
B
229 244Right-handed alpha
Helix 27
AC9
B
250 254Right-handed 310
Helix 28
AD1
B
259 263Right-handed 310
Helix 29
AD2
B
270 285Right-handed alpha
Helix 30
AD3
B
286 294Right-handed alpha
Helix 31
AD4
B
310 323Right-handed alpha
Helix 32
AD5
B
344 356Right-handed alpha
Helix 33
AD6
B
370 374Right-handed 310
Helix 34
AD7
B
410 420Right-handed alpha
Helix 35
AD8
B
426 431Right-handed alpha
Helix 36
AD9
B
432 448Right-handed alpha
Helix 37
AE1
B
455 479Right-handed alpha
Helix 38
AE2
B
490 496Right-handed alpha
Helix 39
AE3
B
501 528Right-handed alpha
Helix 40
AE4
B
533 553Right-handed alpha
Helix 41
AE5
C
65 89Right-handed alpha
Helix 42
AE6
C
94 110Right-handed alpha
Helix 43
AE7
C
157 175Right-handed alpha
Helix 44
AE8
C
189 193Right-handed 310
Helix 45
AE9
C
194 212Right-handed alpha
Helix 46
AF1
C
229 244Right-handed alpha
Helix 47
AF2
C
250 254Right-handed 310
Helix 48
AF3
C
259 263Right-handed 310
Helix 49
AF4
C
270 285Right-handed alpha
Helix 50
AF5
C
286 294Right-handed alpha
Helix 51
AF6
C
310 323Right-handed alpha
Helix 52
AF7
C
344 356Right-handed alpha
Helix 53
AF8
C
370 374Right-handed 310
Helix 54
AF9
C
410 420Right-handed alpha
Helix 55
AG1
C
426 431Right-handed alpha
Helix 56
AG2
C
432 448Right-handed alpha
Helix 57
AG3
C
455 479Right-handed alpha
Helix 58
AG4
C
490 496Right-handed alpha
Helix 59
AG5
C
501 528Right-handed alpha
Helix 60
AG6
C
533 553Right-handed alpha
Helix 61
AG7
D
65 89Right-handed alpha
Helix 62
AG8
D
94 110Right-handed alpha
Helix 63
AG9
D
157 175Right-handed alpha
Helix 64
AH1
D
189 193Right-handed 310
Helix 65
AH2
D
194 212Right-handed alpha
Helix 66
AH3
D
229 244Right-handed alpha
Helix 67
AH4
D
250 254Right-handed 310
Helix 68
AH5
D
259 263Right-handed 310
Helix 69
AH6
D
270 285Right-handed alpha
Helix 70
AH7
D
286 294Right-handed alpha
Helix 71
AH8
D
310 323Right-handed alpha
Helix 72
AH9
D
344 356Right-handed alpha
Helix 73
AI1
D
370 374Right-handed 310
Helix 74
AI2
D
410 420Right-handed alpha
Helix 75
AI3
D
426 431Right-handed alpha
Helix 76
AI4
D
432 448Right-handed alpha
Helix 77
AI5
D
455 479Right-handed alpha
Helix 78
AI6
D
490 496Right-handed alpha
Helix 79
AI7
D
501 528Right-handed alpha
Helix 80
AI8
D
533 553Right-handed alpha
Helix 81
AI9
E
65 89Right-handed alpha
Helix 82
AJ1
E
94 110Right-handed alpha
Helix 83
AJ2
E
157 175Right-handed alpha
Helix 84
AJ3
E
189 193Right-handed 310
Helix 85
AJ4
E
194 212Right-handed alpha
Helix 86
AJ5
E
229 244Right-handed alpha
Helix 87
AJ6
E
250 254Right-handed 310
Helix 88
AJ7
E
259 263Right-handed 310
Helix 89
AJ8
E
270 285Right-handed alpha
Helix 90
AJ9
E
286 294Right-handed alpha
Helix 91
AK1
E
310 323Right-handed alpha
Helix 92
AK2
E
344 356Right-handed alpha
Helix 93
AK3
E
370 374Right-handed 310
Helix 94
AK4
E
410 420Right-handed alpha
Helix 95
AK5
E
426 431Right-handed alpha
Helix 96
AK6
E
432 448Right-handed alpha
Helix 97
AK7
E
455 479Right-handed alpha
Helix 98
AK8
E
490 496Right-handed alpha
Helix 99
AK9
E
501 528Right-handed alpha
Helix 100
AL1
E
533 553Right-handed alpha
Helix 101
AL2
F
65 89Right-handed alpha
Helix 102
AL3
F
94 110Right-handed alpha
Helix 103
AL4
F
157 175Right-handed alpha
Helix 104
AL5
F
189 193Right-handed 310
Helix 105
AL6
F
194 212Right-handed alpha
Helix 106
AL7
F
229 244Right-handed alpha
Helix 107
AL8
F
250 254Right-handed 310
Helix 108
AL9
F
259 263Right-handed 310
Helix 109
AM1
F
270 285Right-handed alpha
Helix 110
AM2
F
286 294Right-handed alpha
Helix 111
AM3
F
310 323Right-handed alpha
Helix 112
AM4
F
344 356Right-handed alpha
Helix 113
AM5
F
370 374Right-handed 310
Helix 114
AM6
F
410 420Right-handed alpha
Helix 115
AM7
F
426 431Right-handed alpha
Helix 116
AM8
F
432 448Right-handed alpha
Helix 117
AM9
F
455 479Right-handed alpha
Helix 118
AN1
F
490 496Right-handed alpha
Helix 119
AN2
F
501 528Right-handed alpha
Helix 120
AN3
F
533 553Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 9ZQU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 224first strand
Strand 2
A
146 152parallel
Strand 3
A
180 186parallel
Strand 4
A
129 138anti-parallel
Strand 5
A
114 123anti-parallel
Strand 6
C
114 123anti-parallel
Strand 7
C
129 138anti-parallel
Strand 8
C
180 186anti-parallel
Strand 9
C
146 152parallel
Strand 10
C
220 224parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 367first strand
Strand 2
A
336 338anti-parallel
Strand 3
A
326 331anti-parallel
Strand 4
A
303 307parallel
Strand 5
A
378 381parallel
Strand 6
A
400 402parallel
Strand 7
A
423 425parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 224first strand
Strand 2
B
146 152parallel
Strand 3
B
180 186parallel
Strand 4
B
129 138anti-parallel
Strand 5
B
114 123anti-parallel
Strand 6
E
114 123anti-parallel
Strand 7
E
129 138anti-parallel
Strand 8
E
180 186anti-parallel
Strand 9
E
146 152parallel
Strand 10
E
220 224parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
365 367first strand
Strand 2
B
336 338anti-parallel
Strand 3
B
326 331anti-parallel
Strand 4
B
303 307parallel
Strand 5
B
378 381parallel
Strand 6
B
400 402parallel
Strand 7
B
423 425parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
365 367first strand
Strand 2
C
336 338anti-parallel
Strand 3
C
326 331anti-parallel
Strand 4
C
303 307parallel
Strand 5
C
378 381parallel
Strand 6
C
400 402parallel
Strand 7
C
423 425parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
220 224first strand
Strand 2
D
146 152parallel
Strand 3
D
180 186parallel
Strand 4
D
129 138anti-parallel
Strand 5
D
114 123anti-parallel
Strand 6
F
114 123anti-parallel
Strand 7
F
129 138anti-parallel
Strand 8
F
180 186anti-parallel
Strand 9
F
146 152parallel
Strand 10
F
220 224parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
365 367first strand
Strand 2
D
336 338anti-parallel
Strand 3
D
326 331anti-parallel
Strand 4
D
303 307parallel
Strand 5
D
378 381parallel
Strand 6
D
400 402parallel
Strand 7
D
423 425parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
365 367first strand
Strand 2
E
336 338anti-parallel
Strand 3
E
326 331anti-parallel
Strand 4
E
303 307parallel
Strand 5
E
378 381parallel
Strand 6
E
400 402parallel
Strand 7
E
423 425parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
365 367first strand
Strand 2
F
336 338anti-parallel
Strand 3
F
326 331anti-parallel
Strand 4
F
303 307parallel
Strand 5
F
378 381parallel
Strand 6
F
400 402parallel
Strand 7
F
423 425parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il