Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZS4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZS4 entry

There are 12 chains in PDB entry 9ZS4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLU 816
K	A 1	A 36
L	U 7	G 34
B	THR 1	ASP 126
C	THR 1	ASP 126
D	THR 1	ASP 126
E	MET 1	LYS 241
F	MET 1	LYS 241
G	MET 1	PRO 239
H	MET 1	PHE 240
I	ALA 9	GLN 326
J	ASN 17	ASP 422

There are123 helices in PDB entry 9ZS4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	9	Right-handed alpha
Helix 2	AA2	A	11	27	Right-handed alpha
Helix 3	AA3	A	33	38	Right-handed alpha
Helix 4	AA4	A	45	50	Right-handed alpha
Helix 5	AA5	A	55	72	Right-handed alpha
Helix 6	AA6	A	124	135	Right-handed alpha
Helix 7	AA7	A	135	146	Right-handed alpha
Helix 8	AA8	A	147	152	Right-handed 310
Helix 9	AA9	A	153	169	Right-handed alpha
Helix 10	AB1	A	182	203	Right-handed alpha
Helix 11	AB2	A	230	236	Right-handed alpha
Helix 12	AB3	A	245	273	Right-handed alpha
Helix 13	AB4	A	275	277	Right-handed 310
Helix 14	AB5	A	296	317	Right-handed alpha
Helix 15	AB6	A	331	335	Right-handed 310
Helix 16	AB7	A	336	354	Right-handed alpha
Helix 17	AB8	A	355	361	Right-handed 310
Helix 18	AB9	A	373	381	Right-handed alpha
Helix 19	AC1	A	405	423	Right-handed alpha
Helix 20	AC2	A	444	448	Right-handed 310
Helix 21	AC3	A	452	454	Right-handed 310
Helix 22	AC4	A	462	467	Right-handed 310
Helix 23	AC5	A	468	476	Right-handed alpha
Helix 24	AC6	A	515	519	Right-handed 310
Helix 25	AC7	A	533	539	Right-handed alpha
Helix 26	AC8	A	565	570	Right-handed alpha
Helix 27	AC9	A	578	604	Right-handed alpha
Helix 28	AD1	A	605	608	Right-handed 310
Helix 29	AD2	A	627	642	Right-handed alpha
Helix 30	AD3	A	666	682	Right-handed alpha
Helix 31	AD4	A	696	716	Right-handed alpha
Helix 32	AD5	A	722	737	Right-handed alpha
Helix 33	AD6	A	738	741	Right-handed 310
Helix 34	AD7	A	742	746	Right-handed 310
Helix 35	AD8	A	747	760	Right-handed alpha
Helix 36	AD9	A	771	793	Right-handed alpha
Helix 37	AE1	A	794	797	Right-handed 310
Helix 38	AE2	A	798	808	Right-handed alpha
Helix 39	AE3	B	3	7	Right-handed 310
Helix 40	AE4	B	14	18	Right-handed 310
Helix 41	AE5	B	20	31	Right-handed alpha
Helix 42	AE6	B	37	56	Right-handed alpha
Helix 43	AE7	B	58	66	Right-handed alpha
Helix 44	AE8	B	66	82	Right-handed alpha
Helix 45	AE9	B	86	98	Right-handed alpha
Helix 46	AF1	B	102	121	Right-handed alpha
Helix 47	AF2	C	2	11	Right-handed alpha
Helix 48	AF3	C	20	31	Right-handed alpha
Helix 49	AF4	C	37	56	Right-handed alpha
Helix 50	AF5	C	58	65	Right-handed alpha
Helix 51	AF6	C	66	70	Right-handed 310
Helix 52	AF7	C	71	76	Right-handed alpha
Helix 53	AF8	C	86	98	Right-handed alpha
Helix 54	AF9	C	102	124	Right-handed alpha
Helix 55	AG1	D	2	6	Right-handed alpha
Helix 56	AG2	D	7	9	Right-handed 310
Helix 57	AG3	D	15	18	Right-handed 310
Helix 58	AG4	D	19	31	Right-handed alpha
Helix 59	AG5	D	37	56	Right-handed alpha
Helix 60	AG6	D	58	70	Right-handed alpha
Helix 61	AG7	D	70	82	Right-handed alpha
Helix 62	AG8	D	86	100	Right-handed alpha
Helix 63	AG9	D	102	124	Right-handed alpha
Helix 64	AH1	E	49	65	Right-handed alpha
Helix 65	AH2	E	77	87	Right-handed alpha
Helix 66	AH3	E	89	104	Right-handed alpha
Helix 67	AH4	E	106	110	Right-handed 310
Helix 68	AH5	E	112	120	Right-handed alpha
Helix 69	AH6	E	132	139	Right-handed alpha
Helix 70	AH7	E	190	206	Right-handed alpha
Helix 71	AH8	E	210	214	Right-handed 310
Helix 72	AH9	E	230	236	Right-handed alpha
Helix 73	AI1	F	49	66	Right-handed alpha
Helix 74	AI2	F	67	72	Right-handed alpha
Helix 75	AI3	F	77	87	Right-handed alpha
Helix 76	AI4	F	89	104	Right-handed alpha
Helix 77	AI5	F	114	120	Right-handed alpha
Helix 78	AI6	F	134	139	Right-handed alpha
Helix 79	AI7	F	189	206	Right-handed alpha
Helix 80	AI8	F	210	214	Right-handed 310
Helix 81	AI9	F	230	237	Right-handed alpha
Helix 82	AJ1	G	49	66	Right-handed alpha
Helix 83	AJ2	G	67	72	Right-handed alpha
Helix 84	AJ3	G	77	88	Right-handed alpha
Helix 85	AJ4	G	89	104	Right-handed alpha
Helix 86	AJ5	G	112	120	Right-handed alpha
Helix 87	AJ6	G	132	139	Right-handed alpha
Helix 88	AJ7	G	190	206	Right-handed alpha
Helix 89	AJ8	G	210	214	Right-handed 310
Helix 90	AJ9	G	230	237	Right-handed alpha
Helix 91	AK1	H	49	65	Right-handed alpha
Helix 92	AK2	H	68	72	Right-handed 310
Helix 93	AK3	H	79	87	Right-handed alpha
Helix 94	AK4	H	89	104	Right-handed alpha
Helix 95	AK5	H	112	120	Right-handed alpha
Helix 96	AK6	H	132	139	Right-handed alpha
Helix 97	AK7	H	189	206	Right-handed alpha
Helix 98	AK8	H	210	214	Right-handed 310
Helix 99	AK9	H	230	237	Right-handed alpha
Helix 100	AL1	I	29	55	Right-handed alpha
Helix 101	AL2	I	81	86	Right-handed alpha
Helix 102	AL3	I	94	99	Right-handed alpha
Helix 103	AL4	I	107	109	Right-handed 310
Helix 104	AL5	I	112	117	Right-handed alpha
Helix 105	AL6	I	118	120	Right-handed 310
Helix 106	AL7	I	124	128	Right-handed 310
Helix 107	AL8	I	179	194	Right-handed alpha
Helix 108	AL9	I	232	236	Right-handed 310
Helix 109	AM1	I	239	243	Right-handed 310
Helix 110	AM2	I	256	261	Right-handed alpha
Helix 111	AM3	J	65	73	Right-handed alpha
Helix 112	AM4	J	79	91	Right-handed alpha
Helix 113	AM5	J	91	96	Right-handed alpha
Helix 114	AM6	J	106	109	Right-handed 310
Helix 115	AM7	J	110	115	Right-handed alpha
Helix 116	AM8	J	153	169	Right-handed alpha
Helix 117	AM9	J	184	197	Right-handed alpha
Helix 118	AN1	J	204	216	Right-handed 310
Helix 119	AN2	J	291	295	Right-handed 310
Helix 120	AN3	J	296	316	Right-handed alpha
Helix 121	AN4	J	316	323	Right-handed alpha
Helix 122	AN5	J	339	347	Right-handed alpha
Helix 123	AN6	J	347	353	Right-handed alpha

There are 25 sheets in PDB entry 9ZS4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	279	283	first strand
Strand 2	A	286	292	anti-parallel
Strand 3	A	221	229	anti-parallel
Strand 4	A	321	329	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	397	399	first strand
Strand 2	A	402	404	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	456	461	first strand
Strand 2	A	432	437	anti-parallel
Strand 3	A	479	484	anti-parallel
Strand 4	A	499	500	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	611	616	first strand
Strand 2	A	619	624	anti-parallel
Strand 3	A	556	562	anti-parallel
Strand 4	A	653	659	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	688	690	first strand
Strand 2	A	693	695	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	174	184	first strand
Strand 2	E	3	15	anti-parallel
Strand 3	E	218	225	anti-parallel
Strand 4	E	228	229	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	146	153	first strand
Strand 2	E	160	168	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	8	first strand
Strand 2	F	179	184	anti-parallel
Strand 3	F	124	126	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	174	177	first strand
Strand 2	F	10	15	anti-parallel
Strand 3	F	218	225	anti-parallel
Strand 4	F	228	229	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	148	153	first strand
Strand 2	F	160	166	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	125	126	first strand
Strand 2	G	174	184	anti-parallel
Strand 3	G	3	15	anti-parallel
Strand 4	G	218	225	anti-parallel
Strand 5	G	228	229	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	146	153	first strand
Strand 2	G	160	168	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6	8	first strand
Strand 2	H	179	182	anti-parallel
Strand 3	H	124	126	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	174	177	first strand
Strand 2	H	11	15	anti-parallel
Strand 3	H	218	221	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	146	153	first strand
Strand 2	H	160	168	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	224	225	first strand
Strand 2	H	228	229	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	168	174	first strand
Strand 2	I	12	20	anti-parallel
Strand 3	I	206	211	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	74	76	first strand
Strand 2	I	103	105	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	130	136	first strand
Strand 2	I	155	161	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	277	278	first strand
Strand 2	I	224	227	anti-parallel
Strand 3	I	312	317	anti-parallel
Strand 4	I	288	289	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	247	250	first strand
Strand 2	I	269	272	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	293	294	first strand
Strand 2	I	307	308	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	48	49	first strand
Strand 2	J	103	104	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	232	235	first strand
Strand 2	J	260	263	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	378	380	first strand
Strand 2	J	389	391	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZS4

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZS4