Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZSH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZSH entry

There is 1 chain in PDB entry 9ZSH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 5ALA 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9ZSH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 43Right-handed alpha
Helix 2
AA2
A
62 77Right-handed alpha
Helix 3
AA3
A
110 115Right-handed alpha
Helix 4
AA4
A
117 122Right-handed alpha
Helix 5
AA5
A
143 157Right-handed alpha
Helix 6
AA6
A
167 180Right-handed alpha
Helix 7
AA7
A
202 212Right-handed alpha
Helix 8
AA8
A
224 226Right-handed 310
Helix 9
AA9
A
227 238Right-handed alpha
Helix 10
AB1
A
260 275Right-handed alpha
Helix 11
AB2
A
281 289Right-handed alpha
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There are 4 sheets in PDB entry 9ZSH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 222first strand
Strand 2
A
188 192parallel
Strand 3
A
160 165parallel
Strand 4
A
125 129parallel
Strand 5
A
81 84parallel
Strand 6
A
46 49parallel
Strand 7
A
8 11parallel
Strand 8
A
242 244parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
A
59 60anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 108first strand
Strand 2
A
90 92anti-parallel
Strand 3
A
138 140anti-parallel
Strand 4
A
133 135anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 253first strand
Strand 2
A
256 257anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il