Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZT5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZT5 entry

There are 5 chains in PDB entry 9ZT5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	UNK 1	UNK 113
B	UNK 2	UNK 106
C	ALA 706	GLN 1142
D	ALA 706	GLU 1144
E	ALA 706	GLU 1144

There are 39 helices in PDB entry 9ZT5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	32	Right-handed 310
Helix 2	AA2	A	87	91	Right-handed 310
Helix 3	AA3	A	101	103	Right-handed 310
Helix 4	AA4	C	737	743	Right-handed alpha
Helix 5	AA5	C	748	782	Right-handed alpha
Helix 6	AA6	C	816	826	Right-handed alpha
Helix 7	AA7	C	833	841	Right-handed alpha
Helix 8	AA8	C	847	855	Right-handed alpha
Helix 9	AA9	C	866	885	Right-handed alpha
Helix 10	AB1	C	897	908	Right-handed alpha
Helix 11	AB2	C	912	918	Right-handed alpha
Helix 12	AB3	C	919	937	Right-handed alpha
Helix 13	AB4	C	946	968	Right-handed alpha
Helix 14	AB5	C	976	984	Right-handed alpha
Helix 15	AB6	C	985	1032	Right-handed alpha
Helix 16	AB7	D	737	742	Right-handed alpha
Helix 17	AB8	D	758	782	Right-handed alpha
Helix 18	AB9	D	816	825	Right-handed alpha
Helix 19	AC1	D	833	839	Right-handed alpha
Helix 20	AC2	D	866	884	Right-handed alpha
Helix 21	AC3	D	885	890	Right-handed 310
Helix 22	AC4	D	897	910	Right-handed alpha
Helix 23	AC5	D	912	919	Right-handed alpha
Helix 24	AC6	D	919	938	Right-handed alpha
Helix 25	AC7	D	945	968	Right-handed alpha
Helix 26	AC8	D	995	1031	Right-handed alpha
Helix 27	AC9	E	738	743	Right-handed alpha
Helix 28	AD1	E	750	756	Right-handed alpha
Helix 29	AD2	E	758	783	Right-handed alpha
Helix 30	AD3	E	816	826	Right-handed alpha
Helix 31	AD4	E	833	841	Right-handed alpha
Helix 32	AD5	E	848	855	Right-handed alpha
Helix 33	AD6	E	866	885	Right-handed alpha
Helix 34	AD7	E	897	910	Right-handed alpha
Helix 35	AD8	E	912	918	Right-handed alpha
Helix 36	AD9	E	919	937	Right-handed alpha
Helix 37	AE1	E	945	967	Right-handed alpha
Helix 38	AE2	E	976	981	Right-handed alpha
Helix 39	AE3	E	988	1032	Right-handed alpha

There are 17 sheets in PDB entry 9ZT5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	7	first strand
Strand 2	A	16	25	anti-parallel
Strand 3	A	78	86	anti-parallel
Strand 4	A	68	73	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	60	first strand
Strand 2	A	46	51	anti-parallel
Strand 3	A	34	39	anti-parallel
Strand 4	A	93	99	anti-parallel
Strand 5	A	108	111	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	6	first strand
Strand 2	B	19	25	anti-parallel
Strand 3	B	70	75	anti-parallel
Strand 4	B	62	66	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	B	33	38	anti-parallel
Strand 3	B	85	90	anti-parallel
Strand 4	B	96	97	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	B	33	38	anti-parallel
Strand 3	B	85	90	anti-parallel
Strand 4	B	101	102	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1078	anti-parallel
Strand 3	C	1055	1056	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1047	1052	first strand
Strand 2	C	1059	1078	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1102	1105	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	734	736	first strand
Strand 2	C	858	860	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1122	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	711	728	first strand
Strand 2	D	1059	1078	anti-parallel
Strand 3	D	1047	1056	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	711	728	first strand
Strand 2	D	1059	1078	anti-parallel
Strand 3	D	1094	1097	anti-parallel
Strand 4	D	1102	1105	anti-parallel
Strand 5	D	1113	1114	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	733	734	first strand
Strand 2	D	860	861	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1120	1125	first strand
Strand 2	D	1086	1090	anti-parallel
Strand 3	D	1081	1083	anti-parallel
Strand 4	D	1133	1134	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	711	727	first strand
Strand 2	E	1059	1078	anti-parallel
Strand 3	E	1047	1056	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	711	727	first strand
Strand 2	E	1059	1078	anti-parallel
Strand 3	E	1094	1097	anti-parallel
Strand 4	E	1102	1106	anti-parallel
Strand 5	E	1109	1113	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	733	736	first strand
Strand 2	E	858	861	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1120	1125	first strand
Strand 2	E	1086	1090	anti-parallel
Strand 3	E	1081	1082	anti-parallel
Strand 4	E	1133	1134	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZT5

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZT5