Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZT7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZT7 entry

There are 5 chains in PDB entry 9ZT7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 1	CYS 216
B	GLU 1	CYS 214
C	VAL 705	GLU 1144
D	TYR 707	GLU 1144
E	ALA 706	GLU 1144

There are 43 helices in PDB entry 9ZT7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	32	Right-handed 310
Helix 2	AA2	A	83	87	Right-handed 310
Helix 3	AA3	A	156	158	Right-handed 310
Helix 4	AA4	A	187	189	Right-handed 310
Helix 5	AA5	B	79	83	Right-handed 310
Helix 6	AA6	B	121	128	Right-handed alpha
Helix 7	AA7	B	183	188	Right-handed alpha
Helix 8	AA8	C	737	742	Right-handed alpha
Helix 9	AA9	C	748	783	Right-handed alpha
Helix 10	AB1	C	793	798	Right-handed 310
Helix 11	AB2	C	816	827	Right-handed alpha
Helix 12	AB3	C	833	842	Right-handed alpha
Helix 13	AB4	C	848	855	Right-handed alpha
Helix 14	AB5	C	866	882	Right-handed alpha
Helix 15	AB6	C	897	908	Right-handed alpha
Helix 16	AB7	C	913	918	Right-handed alpha
Helix 17	AB8	C	919	937	Right-handed alpha
Helix 18	AB9	C	945	967	Right-handed alpha
Helix 19	AC1	C	989	1032	Right-handed alpha
Helix 20	AC2	D	737	743	Right-handed alpha
Helix 21	AC3	D	748	783	Right-handed alpha
Helix 22	AC4	D	816	826	Right-handed alpha
Helix 23	AC5	D	832	841	Right-handed alpha
Helix 24	AC6	D	849	855	Right-handed alpha
Helix 25	AC7	D	866	884	Right-handed alpha
Helix 26	AC8	D	897	910	Right-handed alpha
Helix 27	AC9	D	913	919	Right-handed alpha
Helix 28	AD1	D	919	937	Right-handed alpha
Helix 29	AD2	D	945	966	Right-handed alpha
Helix 30	AD3	D	991	1032	Right-handed alpha
Helix 31	AD4	E	737	744	Right-handed alpha
Helix 32	AD5	E	748	781	Right-handed alpha
Helix 33	AD6	E	793	798	Right-handed 310
Helix 34	AD7	E	816	826	Right-handed alpha
Helix 35	AD8	E	832	842	Right-handed alpha
Helix 36	AD9	E	848	855	Right-handed alpha
Helix 37	AE1	E	866	882	Right-handed alpha
Helix 38	AE2	E	897	910	Right-handed alpha
Helix 39	AE3	E	913	918	Right-handed alpha
Helix 40	AE4	E	919	938	Right-handed alpha
Helix 41	AE5	E	945	967	Right-handed alpha
Helix 42	AE6	E	976	984	Right-handed alpha
Helix 43	AE7	E	985	1032	Right-handed alpha

There are 22 sheets in PDB entry 9ZT7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	7	first strand
Strand 2	A	18	25	anti-parallel
Strand 3	A	77	82	anti-parallel
Strand 4	A	67	72	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	12	first strand
Strand 2	A	107	111	parallel
Strand 3	A	88	95	anti-parallel
Strand 4	A	34	39	anti-parallel
Strand 5	A	45	51	anti-parallel
Strand 6	A	57	59	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	12	first strand
Strand 2	A	107	111	parallel
Strand 3	A	88	95	anti-parallel
Strand 4	A	100	103	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	124	first strand
Strand 2	A	135	145	anti-parallel
Strand 3	A	176	185	anti-parallel
Strand 4	A	163	165	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	124	first strand
Strand 2	A	135	145	anti-parallel
Strand 3	A	176	185	anti-parallel
Strand 4	A	169	170	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	154	first strand
Strand 2	A	195	200	anti-parallel
Strand 3	A	205	210	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	6	first strand
Strand 2	B	19	25	anti-parallel
Strand 3	B	70	75	anti-parallel
Strand 4	B	62	67	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	12	first strand
Strand 2	B	102	105	parallel
Strand 3	B	85	90	anti-parallel
Strand 4	B	33	38	anti-parallel
Strand 5	B	45	49	anti-parallel
Strand 6	B	53	54	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	118	first strand
Strand 2	B	129	139	anti-parallel
Strand 3	B	173	182	anti-parallel
Strand 4	B	159	163	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	150	first strand
Strand 2	B	191	198	anti-parallel
Strand 3	B	205	210	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1077	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1077	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1102	1105	anti-parallel
Strand 5	C	1113	1114	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	733	736	first strand
Strand 2	C	858	861	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1125	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	711	728	first strand
Strand 2	D	1059	1076	anti-parallel
Strand 3	D	1047	1056	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	733	736	first strand
Strand 2	D	858	861	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1120	1125	first strand
Strand 2	D	1086	1090	anti-parallel
Strand 3	D	1081	1083	anti-parallel
Strand 4	D	1133	1134	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1094	1097	first strand
Strand 2	D	1102	1105	anti-parallel
Strand 3	D	1113	1114	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	711	728	first strand
Strand 2	E	1059	1076	anti-parallel
Strand 3	E	1047	1056	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	733	736	first strand
Strand 2	E	858	861	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1120	1125	first strand
Strand 2	E	1086	1090	anti-parallel
Strand 3	E	1081	1082	anti-parallel
Strand 4	E	1133	1134	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1094	1097	first strand
Strand 2	E	1102	1105	anti-parallel
Strand 3	E	1113	1114	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZT7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZT7