Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZT8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZT8 entry

There are 3 chains in PDB entry 9ZT8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 704	GLN 1142
B	CYS 704	GLN 1142
C	CYS 704	GLN 1142

There are 45 helices in PDB entry 9ZT8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	737	743	Right-handed alpha
Helix 2	AA2	A	746	754	Right-handed alpha
Helix 3	AA3	A	755	757	Right-handed 310
Helix 4	AA4	A	758	783	Right-handed alpha
Helix 5	AA5	A	816	826	Right-handed alpha
Helix 6	AA6	A	833	840	Right-handed alpha
Helix 7	AA7	A	848	855	Right-handed alpha
Helix 8	AA8	A	866	884	Right-handed alpha
Helix 9	AA9	A	897	908	Right-handed alpha
Helix 10	AB1	A	913	918	Right-handed alpha
Helix 11	AB2	A	919	940	Right-handed alpha
Helix 12	AB3	A	945	965	Right-handed alpha
Helix 13	AB4	A	966	968	Right-handed 310
Helix 14	AB5	A	976	984	Right-handed alpha
Helix 15	AB6	A	985	1033	Right-handed alpha
Helix 16	AB7	B	737	743	Right-handed alpha
Helix 17	AB8	B	746	754	Right-handed alpha
Helix 18	AB9	B	755	757	Right-handed 310
Helix 19	AC1	B	758	783	Right-handed alpha
Helix 20	AC2	B	816	826	Right-handed alpha
Helix 21	AC3	B	833	840	Right-handed alpha
Helix 22	AC4	B	848	855	Right-handed alpha
Helix 23	AC5	B	866	884	Right-handed alpha
Helix 24	AC6	B	897	908	Right-handed alpha
Helix 25	AC7	B	913	918	Right-handed alpha
Helix 26	AC8	B	919	940	Right-handed alpha
Helix 27	AC9	B	945	965	Right-handed alpha
Helix 28	AD1	B	966	968	Right-handed 310
Helix 29	AD2	B	976	984	Right-handed alpha
Helix 30	AD3	B	985	1033	Right-handed alpha
Helix 31	AD4	C	737	743	Right-handed alpha
Helix 32	AD5	C	746	754	Right-handed alpha
Helix 33	AD6	C	755	757	Right-handed 310
Helix 34	AD7	C	758	783	Right-handed alpha
Helix 35	AD8	C	816	826	Right-handed alpha
Helix 36	AD9	C	833	840	Right-handed alpha
Helix 37	AE1	C	848	855	Right-handed alpha
Helix 38	AE2	C	866	884	Right-handed alpha
Helix 39	AE3	C	897	908	Right-handed alpha
Helix 40	AE4	C	913	918	Right-handed alpha
Helix 41	AE5	C	919	940	Right-handed alpha
Helix 42	AE6	C	945	965	Right-handed alpha
Helix 43	AE7	C	966	968	Right-handed 310
Helix 44	AE8	C	976	984	Right-handed alpha
Helix 45	AE9	C	985	1033	Right-handed alpha

There are 12 sheets in PDB entry 9ZT8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	728	first strand
Strand 2	A	1059	1078	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	728	first strand
Strand 2	A	1059	1078	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1102	1105	anti-parallel
Strand 5	A	1113	1114	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	733	736	first strand
Strand 2	A	858	861	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1122	first strand
Strand 2	A	1087	1090	anti-parallel
Strand 3	A	1081	1082	anti-parallel
Strand 4	A	1133	1134	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	728	first strand
Strand 2	B	1059	1078	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	728	first strand
Strand 2	B	1059	1078	anti-parallel
Strand 3	B	1094	1097	anti-parallel
Strand 4	B	1102	1105	anti-parallel
Strand 5	B	1113	1114	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	736	first strand
Strand 2	B	858	861	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1122	first strand
Strand 2	B	1087	1090	anti-parallel
Strand 3	B	1081	1082	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1078	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1078	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1102	1105	anti-parallel
Strand 5	C	1113	1114	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	733	736	first strand
Strand 2	C	858	861	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1122	first strand
Strand 2	C	1087	1090	anti-parallel
Strand 3	C	1081	1082	anti-parallel
Strand 4	C	1133	1134	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZT8

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZT8