Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZTC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZTC entry

There is 1 chain in PDB entry 9ZTC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 140SER 1853
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 9ZTC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
148 154Right-handed alpha
Helix 2
AA2
A
160 176Right-handed alpha
Helix 3
AA3
A
178 200Right-handed alpha
Helix 4
AA4
A
201 214Right-handed alpha
Helix 5
AA5
A
219 229Right-handed alpha
Helix 6
AA6
A
232 240Right-handed alpha
Helix 7
AA7
A
269 280Right-handed alpha
Helix 8
AA8
A
281 296Right-handed alpha
Helix 9
AA9
A
297 314Right-handed alpha
Helix 10
AB1
A
315 320Right-handed 310
Helix 11
AB2
A
321 338Right-handed alpha
Helix 12
AB3
A
338 344Right-handed alpha
Helix 13
AB4
A
351 357Right-handed alpha
Helix 14
AB5
A
357 369Right-handed alpha
Helix 15
AB6
A
389 399Right-handed alpha
Helix 16
AB7
A
399 405Right-handed alpha
Helix 17
AB8
A
418 423Right-handed alpha
Helix 18
AB9
A
430 435Right-handed alpha
Helix 19
AC1
A
443 452Right-handed alpha
Helix 20
AC2
A
452 471Right-handed alpha
Helix 21
AC3
A
488 518Right-handed alpha
Helix 22
AC4
A
524 552Right-handed alpha
Helix 23
AC5
A
559 583Right-handed alpha
Helix 24
AC6
A
589 594Right-handed alpha
Helix 25
AC7
A
615 640Right-handed alpha
Helix 26
AC8
A
641 643Right-handed 310
Helix 27
AC9
A
644 654Right-handed alpha
Helix 28
AD1
A
666 671Right-handed alpha
Helix 29
AD2
A
671 713Right-handed alpha
Helix 30
AD3
A
835 839Right-handed 310
Helix 31
AD4
A
856 861Right-handed alpha
Helix 32
AD5
A
871 880Right-handed alpha
Helix 33
AD6
A
880 889Right-handed alpha
Helix 34
AD7
A
935 947Right-handed alpha
Helix 35
AD8
A
949 972Right-handed alpha
Helix 36
AD9
A
972 980Right-handed alpha
Helix 37
AE1
A
982 997Right-handed alpha
Helix 38
AE2
A
1011 1025Right-handed alpha
Helix 39
AE3
A
1081 1091Right-handed alpha
Helix 40
AE4
A
1108 1121Right-handed alpha
Helix 41
AE5
A
1177 1185Right-handed alpha
Helix 42
AE6
A
1201 1205Right-handed alpha
Helix 43
AE7
A
1206 1208Right-handed 310
Helix 44
AE8
A
1220 1232Right-handed alpha
Helix 45
AE9
A
1266 1272Right-handed alpha
Helix 46
AF1
A
1272 1282Right-handed alpha
Helix 47
AF2
A
1283 1294Right-handed alpha
Helix 48
AF3
A
1294 1325Right-handed alpha
Helix 49
AF4
A
1348 1382Right-handed alpha
Helix 50
AF5
A
1382 1392Right-handed alpha
Helix 51
AF6
A
1437 1447Right-handed alpha
Helix 52
AF7
A
1448 1467Right-handed alpha
Helix 53
AF8
A
1471 1490Right-handed alpha
Helix 54
AF9
A
1495 1512Right-handed alpha
Helix 55
AG1
A
1521 1529Right-handed alpha
Helix 56
AG2
A
1558 1583Right-handed alpha
Helix 57
AG3
A
1598 1621Right-handed alpha
Helix 58
AG4
A
1640 1665Right-handed alpha
Helix 59
AG5
A
1668 1695Right-handed alpha
Helix 60
AG6
A
1726 1754Right-handed alpha
Helix 61
AG7
A
1754 1760Right-handed alpha
Helix 62
AG8
A
1762 1775Right-handed alpha
Helix 63
AG9
A
1786 1825Right-handed alpha
Helix 64
AH1
A
1834 1838Right-handed 310
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There are 2 sheets in PDB entry 9ZTC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
370 373first strand
Strand 2
A
376 379anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1068 1071first strand
Strand 2
A
1046 1053anti-parallel
Strand 3
A
1029 1036anti-parallel
Strand 4
A
998 1004parallel
Strand 5
A
842 848parallel
Strand 6
A
1097 1100parallel
Strand 7
A
1197 1200anti-parallel
Strand 8
A
1148 1154anti-parallel
Strand 9
A
1235 1243parallel
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