Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZUM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZUM entry

There are 7 chains in PDB entry 9ZUM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 248ASN 326
B
 HIS 249ASN 326
C
 HIS 249ASN 326
D
 SER 248ILE 327
E
 HIS 249GLU 325
Y
 T 8 T 17
T
 A 5 A 14
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 9ZUM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
251 256Right-handed 310
Helix 2
AA2
A
264 274Right-handed alpha
Helix 3
AA3
A
278 284Right-handed alpha
Helix 4
AA4
A
286 292Right-handed alpha
Helix 5
AA5
A
297 310Right-handed alpha
Helix 6
AA6
B
251 256Right-handed 310
Helix 7
AA7
B
257 261Right-handed 310
Helix 8
AA8
B
264 274Right-handed alpha
Helix 9
AA9
B
278 285Right-handed alpha
Helix 10
AB1
B
286 292Right-handed alpha
Helix 11
AB2
B
297 311Right-handed alpha
Helix 12
AB3
C
251 255Right-handed 310
Helix 13
AB4
C
257 261Right-handed 310
Helix 14
AB5
C
264 274Right-handed alpha
Helix 15
AB6
C
278 285Right-handed alpha
Helix 16
AB7
C
286 292Right-handed alpha
Helix 17
AB8
C
297 311Right-handed alpha
Helix 18
AB9
D
251 256Right-handed 310
Helix 19
AC1
D
264 274Right-handed alpha
Helix 20
AC2
D
278 283Right-handed alpha
Helix 21
AC3
D
286 292Right-handed alpha
Helix 22
AC4
D
297 310Right-handed alpha
Helix 23
AC5
E
257 261Right-handed 310
Helix 24
AC6
E
264 274Right-handed alpha
Helix 25
AC7
E
278 284Right-handed alpha
Helix 26
AC8
E
286 291Right-handed alpha
Helix 27
AC9
E
297 310Right-handed alpha
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There are no sheets in PDB entry 9ZUM
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il