Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZW5 entry

There are 2 chains in PDB entry 9ZW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -2PHE 138
B
 GLY -2PHE 138
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9ZW5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 10Right-handed 310
Helix 2
AA2
A
11 24Right-handed alpha
Helix 3
AA3
A
38 50Right-handed alpha
Helix 4
AA4
A
86 93Right-handed alpha
Helix 5
AA5
A
94 102Right-handed alpha
Helix 6
AA6
A
110 117Right-handed 310
Helix 7
AA7
B
9 22Right-handed alpha
Helix 8
AA8
B
38 50Right-handed alpha
Helix 9
AA9
B
86 93Right-handed alpha
Helix 10
AB1
B
94 101Right-handed alpha
Helix 11
AB2
B
110 117Right-handed 310
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There are 2 sheets in PDB entry 9ZW5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
134 138anti-parallel
Strand 3
A
122 128anti-parallel
Strand 4
A
28 32parallel
Strand 5
A
104 108parallel
Strand 6
A
75 80parallel
Strand 7
A
64 68anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 6first strand
Strand 2
B
134 138anti-parallel
Strand 3
B
122 128anti-parallel
Strand 4
B
28 32parallel
Strand 5
B
104 108parallel
Strand 6
B
75 80parallel
Strand 7
B
64 68anti-parallel
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