Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZXA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZXA entry

There are 5 chains in PDB entry 9ZXA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 401	VAL 548
B	GLN 401	VAL 548
C	GLN 401	VAL 548
D	GLN 401	VAL 548
E	GLN 401	HIS 455

There are 62 helices in PDB entry 9ZXA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	414	426	Right-handed alpha
Helix 2	AA2	A	433	440	Right-handed 310
Helix 3	AA3	A	453	468	Right-handed alpha
Helix 4	AA4	A	481	494	Right-handed alpha
Helix 5	AA5	A	511	519	Right-handed alpha
Helix 6	AA6	A	524	535	Right-handed alpha
Helix 7	AA7	A	540	546	Right-handed alpha
Helix 8	AA8	B	414	426	Right-handed alpha
Helix 9	AA9	B	433	440	Right-handed 310
Helix 10	AB1	B	451	469	Right-handed alpha
Helix 11	AB2	B	481	484	Right-handed 310
Helix 12	AB3	B	485	494	Right-handed alpha
Helix 13	AB4	B	511	519	Right-handed alpha
Helix 14	AB5	B	524	535	Right-handed alpha
Helix 15	AB6	B	540	546	Right-handed alpha
Helix 16	AB7	C	414	426	Right-handed alpha
Helix 17	AB8	C	433	441	Right-handed 310
Helix 18	AB9	C	453	468	Right-handed alpha
Helix 19	AC1	C	481	495	Right-handed alpha
Helix 20	AC2	C	511	519	Right-handed alpha
Helix 21	AC3	C	524	534	Right-handed alpha
Helix 22	AC4	C	540	547	Right-handed alpha
Helix 23	AC5	D	414	426	Right-handed alpha
Helix 24	AC6	D	433	440	Right-handed 310
Helix 25	AC7	D	450	468	Right-handed alpha
Helix 26	AC8	D	481	484	Right-handed 310
Helix 27	AC9	D	485	495	Right-handed alpha
Helix 28	AD1	D	511	519	Right-handed alpha
Helix 29	AD2	D	524	535	Right-handed alpha
Helix 30	AD3	D	540	547	Right-handed alpha
Helix 31	AD4	E	414	425	Right-handed alpha
Helix 32	AD5	E	433	435	Right-handed 310
Helix 33	AD6	E	436	441	Right-handed alpha
Helix 34	AD7	E	449	469	Right-handed alpha
Helix 35	AD8	E	481	484	Right-handed 310
Helix 36	AD9	E	485	495	Right-handed alpha
Helix 37	AE1	E	511	519	Right-handed alpha
Helix 38	AE2	E	524	535	Right-handed alpha
Helix 39	AE3	E	540	546	Right-handed alpha
Helix 40	AE4	F	414	425	Right-handed alpha
Helix 41	AE5	F	433	440	Right-handed 310
Helix 42	AE6	F	453	469	Right-handed alpha
Helix 43	AE7	F	481	484	Right-handed 310
Helix 44	AE8	F	485	495	Right-handed alpha
Helix 45	AE9	F	511	519	Right-handed alpha
Helix 46	AF1	F	524	534	Right-handed alpha
Helix 47	AF2	F	540	547	Right-handed alpha
Helix 48	AF3	G	414	424	Right-handed alpha
Helix 49	AF4	G	433	440	Right-handed 310
Helix 50	AF5	G	453	468	Right-handed alpha
Helix 51	AF6	G	481	484	Right-handed 310
Helix 52	AF7	G	485	495	Right-handed alpha
Helix 53	AF8	G	511	519	Right-handed alpha
Helix 54	AF9	G	524	535	Right-handed alpha
Helix 55	AG1	G	540	546	Right-handed alpha
Helix 56	AG2	H	414	426	Right-handed alpha
Helix 57	AG3	H	433	440	Right-handed 310
Helix 58	AG4	H	450	469	Right-handed alpha
Helix 59	AG5	H	481	495	Right-handed alpha
Helix 60	AG6	H	511	519	Right-handed alpha
Helix 61	AG7	H	524	534	Right-handed alpha
Helix 62	AG8	H	540	546	Right-handed alpha

There are 8 sheets in PDB entry 9ZXA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	430	432	first strand
Strand 2	A	473	475	parallel
Strand 3	A	403	407	parallel
Strand 4	A	498	502	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	430	432	first strand
Strand 2	B	473	475	parallel
Strand 3	B	403	407	parallel
Strand 4	B	498	502	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	430	432	first strand
Strand 2	C	473	475	parallel
Strand 3	C	403	407	parallel
Strand 4	C	498	502	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	430	432	first strand
Strand 2	D	473	475	parallel
Strand 3	D	403	407	parallel
Strand 4	D	498	502	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	430	432	first strand
Strand 2	E	473	475	parallel
Strand 3	E	403	407	parallel
Strand 4	E	498	502	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	430	432	first strand
Strand 2	F	473	475	parallel
Strand 3	F	403	407	parallel
Strand 4	F	498	502	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	430	432	first strand
Strand 2	G	473	475	parallel
Strand 3	G	403	407	parallel
Strand 4	G	498	502	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	430	432	first strand
Strand 2	H	473	475	parallel
Strand 3	H	403	407	parallel
Strand 4	H	498	502	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZXA

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZXA