Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZY1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZY1 entry

There are 8 chains in PDB entry 9ZY1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 MET 1ALA 215
2
 VAL 5GLU 154
3
 MET 1SER 183
A
 MET 1ALA 215
B
 VAL 5GLU 154
C
 MET 1SER 183
D
 U 1 U 8
E
 A 7 A 14
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 9ZY1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
1
19 32Right-handed alpha
Helix 2
AA2
1
43 47Right-handed 310
Helix 3
AA3
1
101 110Right-handed alpha
Helix 4
AA4
1
118 128Right-handed alpha
Helix 5
AA5
1
137 142Right-handed 310
Helix 6
AA6
1
147 160Right-handed alpha
Helix 7
AA7
1
206 211Right-handed alpha
Helix 8
AA8
2
6 15Right-handed alpha
Helix 9
AA9
2
15 23Right-handed alpha
Helix 10
AB1
2
36 50Right-handed alpha
Helix 11
AB2
2
82 84Right-handed 310
Helix 12
AB3
2
128 135Right-handed alpha
Helix 13
AB4
2
136 149Right-handed alpha
Helix 14
AB5
3
5 13Right-handed alpha
Helix 15
AB6
3
54 67Right-handed alpha
Helix 16
AB7
3
85 99Right-handed alpha
Helix 17
AB8
3
116 129Right-handed alpha
Helix 18
AB9
3
137 148Right-handed alpha
Helix 19
AC1
3
158 183Right-handed alpha
Helix 20
AC2
A
19 32Right-handed alpha
Helix 21
AC3
A
43 47Right-handed 310
Helix 22
AC4
A
101 110Right-handed alpha
Helix 23
AC5
A
118 128Right-handed alpha
Helix 24
AC6
A
137 142Right-handed 310
Helix 25
AC7
A
147 160Right-handed alpha
Helix 26
AC8
A
206 211Right-handed alpha
Helix 27
AC9
B
6 15Right-handed alpha
Helix 28
AD1
B
15 23Right-handed alpha
Helix 29
AD2
B
36 50Right-handed alpha
Helix 30
AD3
B
82 84Right-handed 310
Helix 31
AD4
B
128 135Right-handed alpha
Helix 32
AD5
B
136 149Right-handed alpha
Helix 33
AD6
C
5 13Right-handed alpha
Helix 34
AD7
C
54 67Right-handed alpha
Helix 35
AD8
C
85 99Right-handed alpha
Helix 36
AD9
C
116 129Right-handed alpha
Helix 37
AE1
C
137 148Right-handed alpha
Helix 38
AE2
C
158 183Right-handed alpha
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There are 6 sheets in PDB entry 9ZY1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
40 42first strand
Strand 2
1
56 61anti-parallel
Strand 3
1
65 72anti-parallel
Strand 4
1
85 92anti-parallel
Strand 5
1
7 15anti-parallel
Strand 6
2
64 70anti-parallel
Strand 7
2
55 59anti-parallel
Strand 8
2
25 28anti-parallel
Strand 9
2
120 127anti-parallel
Strand 10
2
106 115anti-parallel
Strand 11
2
94 103anti-parallel
Strand 12
2
86 87anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
40 42first strand
Strand 2
1
56 61anti-parallel
Strand 3
1
65 72anti-parallel
Strand 4
1
85 92anti-parallel
Strand 5
1
97 99anti-parallel
Strand 6
2
94 103parallel
Strand 7
2
86 87anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
43 47first strand
Strand 2
3
30 36anti-parallel
Strand 3
3
74 82anti-parallel
Strand 4
3
102 110parallel
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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 42first strand
Strand 2
A
56 61anti-parallel
Strand 3
A
65 72anti-parallel
Strand 4
A
85 92anti-parallel
Strand 5
A
7 15anti-parallel
Strand 6
B
64 70anti-parallel
Strand 7
B
55 59anti-parallel
Strand 8
B
25 28anti-parallel
Strand 9
B
120 127anti-parallel
Strand 10
B
106 115anti-parallel
Strand 11
B
94 103anti-parallel
Strand 12
B
86 87anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 42first strand
Strand 2
A
56 61anti-parallel
Strand 3
A
65 72anti-parallel
Strand 4
A
85 92anti-parallel
Strand 5
A
97 99anti-parallel
Strand 6
B
94 103parallel
Strand 7
B
86 87anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 47first strand
Strand 2
C
30 36anti-parallel
Strand 3
C
74 82anti-parallel
Strand 4
C
102 110parallel
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