Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZZ6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZZ6 entry

There are 11 chains in PDB entry 9ZZ6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 22	ARG 993
B	LEU 7	SER 297
C	GLY 3	PHE 261
D	ARG 14	LEU 183
E	MET 1	SER 104
F	GLY 10	TYR 110
G	ASP 43	LEU 178
H	MET 1	CYS 210
I	GLY 50	ALA 210
K	GLN 1	SER 119
L	GLN 1	SER 114

There are 79 helices in PDB entry 9ZZ6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	27	Right-handed 310
Helix 2	AA2	A	82	85	Right-handed 310
Helix 3	AA3	A	262	265	Right-handed 310
Helix 4	AA4	A	448	452	Right-handed 310
Helix 5	AA5	A	463	468	Right-handed alpha
Helix 6	AA6	A	469	474	Right-handed alpha
Helix 7	AA7	A	479	509	Right-handed alpha
Helix 8	AA8	A	512	516	Right-handed 310
Helix 9	AA9	A	655	666	Right-handed alpha
Helix 10	AB1	A	751	754	Right-handed 310
Helix 11	AB2	A	823	827	Right-handed 310
Helix 12	AB3	A	876	879	Right-handed 310
Helix 13	AB4	A	887	893	Right-handed alpha
Helix 14	AB5	A	905	909	Right-handed 310
Helix 15	AB6	A	961	992	Right-handed alpha
Helix 16	AB7	B	14	26	Right-handed alpha
Helix 17	AB8	B	29	44	Right-handed alpha
Helix 18	AB9	B	44	49	Right-handed alpha
Helix 19	AC1	B	51	67	Right-handed alpha
Helix 20	AC2	B	68	83	Right-handed alpha
Helix 21	AC3	B	86	100	Right-handed alpha
Helix 22	AC4	B	102	117	Right-handed alpha
Helix 23	AC5	B	121	135	Right-handed alpha
Helix 24	AC6	B	136	151	Right-handed alpha
Helix 25	AC7	B	154	168	Right-handed alpha
Helix 26	AC8	B	170	179	Right-handed alpha
Helix 27	AC9	B	180	185	Right-handed alpha
Helix 28	AD1	B	188	203	Right-handed alpha
Helix 29	AD2	B	204	222	Right-handed alpha
Helix 30	AD3	B	225	242	Right-handed alpha
Helix 31	AD4	B	246	275	Right-handed alpha
Helix 32	AD5	B	278	293	Right-handed alpha
Helix 33	AD6	C	9	16	Right-handed alpha
Helix 34	AD7	C	16	39	Right-handed alpha
Helix 35	AD8	C	45	64	Right-handed alpha
Helix 36	AD9	C	69	82	Right-handed alpha
Helix 37	AE1	C	84	93	Right-handed alpha
Helix 38	AE2	C	104	130	Right-handed alpha
Helix 39	AE3	C	145	149	Right-handed 310
Helix 40	AE4	C	168	179	Right-handed alpha
Helix 41	AE5	C	182	187	Right-handed alpha
Helix 42	AE6	C	195	200	Right-handed alpha
Helix 43	AE7	C	201	204	Right-handed 310
Helix 44	AE8	C	215	228	Right-handed alpha
Helix 45	AE9	C	236	244	Right-handed alpha
Helix 46	AF1	C	247	251	Right-handed 310
Helix 47	AF2	D	23	28	Right-handed alpha
Helix 48	AF3	D	59	73	Right-handed alpha
Helix 49	AF4	D	74	93	Right-handed alpha
Helix 50	AF5	D	95	115	Right-handed alpha
Helix 51	AF6	D	115	126	Right-handed alpha
Helix 52	AF7	D	128	154	Right-handed alpha
Helix 53	AF8	D	160	165	Right-handed 310
Helix 54	AF9	E	2	34	Right-handed alpha
Helix 55	AG1	E	42	65	Right-handed alpha
Helix 56	AG2	E	73	77	Right-handed 310
Helix 57	AG3	E	87	91	Right-handed 310
Helix 58	AG4	E	95	101	Right-handed alpha
Helix 59	AG5	F	15	45	Right-handed alpha
Helix 60	AG6	F	48	70	Right-handed alpha
Helix 61	AG7	F	73	78	Right-handed alpha
Helix 62	AG8	F	81	86	Right-handed alpha
Helix 63	AG9	F	88	108	Right-handed alpha
Helix 64	AH1	G	57	61	Right-handed 310
Helix 65	AH2	G	156	162	Right-handed alpha
Helix 66	AH3	G	163	169	Right-handed alpha
Helix 67	AH4	G	170	178	Right-handed alpha
Helix 68	AH5	H	7	21	Right-handed alpha
Helix 69	AH6	H	67	84	Right-handed alpha
Helix 70	AH7	H	105	119	Right-handed alpha
Helix 71	AH8	H	163	177	Right-handed alpha
Helix 72	AH9	H	185	192	Right-handed alpha
Helix 73	AI1	H	199	210	Right-handed alpha
Helix 74	AI2	I	91	104	Right-handed alpha
Helix 75	AI3	I	133	140	Right-handed alpha
Helix 76	AI4	I	175	179	Right-handed 310
Helix 77	AI5	I	197	205	Right-handed alpha
Helix 78	AI6	I	205	210	Right-handed alpha
Helix 79	AI7	L	87	91	Right-handed 310

There are 37 sheets in PDB entry 9ZZ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	35	first strand
Strand 2	A	941	942	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	44	first strand
Strand 2	A	55	58	anti-parallel
Strand 3	A	62	66	anti-parallel
Strand 4	A	73	78	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	93	first strand
Strand 2	A	96	101	anti-parallel
Strand 3	A	106	111	anti-parallel
Strand 4	A	117	122	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	134	first strand
Strand 2	A	142	143	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	146	first strand
Strand 2	A	150	154	anti-parallel
Strand 3	A	161	166	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	180	first strand
Strand 2	A	185	192	anti-parallel
Strand 3	A	196	203	anti-parallel
Strand 4	A	212	215	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	234	239	first strand
Strand 2	A	244	249	anti-parallel
Strand 3	A	257	260	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	277	first strand
Strand 2	A	290	296	anti-parallel
Strand 3	A	299	305	anti-parallel
Strand 4	A	310	311	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	277	first strand
Strand 2	A	290	296	anti-parallel
Strand 3	A	299	305	anti-parallel
Strand 4	A	315	317	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	327	first strand
Strand 2	A	330	338	anti-parallel
Strand 3	A	372	379	anti-parallel
Strand 4	A	391	394	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	411	first strand
Strand 2	A	417	425	anti-parallel
Strand 3	A	430	434	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	457	458	first strand
Strand 2	A	535	539	anti-parallel
Strand 3	A	544	549	anti-parallel
Strand 4	A	555	560	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	569	574	first strand
Strand 2	A	587	592	anti-parallel
Strand 3	A	599	605	anti-parallel
Strand 4	A	610	611	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	626	632	first strand
Strand 2	A	638	643	anti-parallel
Strand 3	A	649	651	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	692	693	first strand
Strand 2	A	680	686	anti-parallel
Strand 3	A	669	674	anti-parallel
Strand 4	D	176	177	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	697	699	first strand
Strand 2	A	680	686	anti-parallel
Strand 3	A	669	674	anti-parallel
Strand 4	D	180	181	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	705	712	first strand
Strand 2	A	740	747	anti-parallel
Strand 3	A	756	763	anti-parallel
Strand 4	A	769	776	anti-parallel
Strand 5	I	191	192	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	723	725	first strand
Strand 2	A	731	733	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	778	779	first strand
Strand 2	A	796	797	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	785	787	first strand
Strand 2	A	790	792	anti-parallel
Strand 3	A	804	811	anti-parallel
Strand 4	A	832	839	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	846	849	first strand
Strand 2	A	860	864	anti-parallel
Strand 3	A	870	874	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	922	926	first strand
Strand 2	A	933	937	anti-parallel
Strand 3	A	945	947	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	139	first strand
Strand 2	C	165	167	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	50	first strand
Strand 2	G	83	89	anti-parallel
Strand 3	G	77	78	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	67	68	first strand
Strand 2	G	92	98	anti-parallel
Strand 3	G	108	112	anti-parallel
Strand 4	G	120	122	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	6	first strand
Strand 2	H	53	54	parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	56	62	first strand
Strand 2	H	26	33	anti-parallel
Strand 3	H	87	95	anti-parallel
Strand 4	H	123	126	parallel
Strand 5	H	144	146	anti-parallel
Strand 6	H	151	153	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	54	58	first strand
Strand 2	I	69	74	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	76	77	first strand
Strand 2	I	82	83	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	110	113	first strand
Strand 2	I	127	130	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	156	162	first strand
Strand 2	I	143	150	anti-parallel
Strand 3	I	182	188	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	2	3	first strand
Strand 2	K	25	26	anti-parallel

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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	11	12	first strand
Strand 2	K	110	113	parallel
Strand 3	K	91	99	anti-parallel
Strand 4	K	34	39	anti-parallel
Strand 5	K	45	51	anti-parallel
Strand 6	K	57	59	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	11	12	first strand
Strand 2	K	110	113	parallel
Strand 3	K	91	99	anti-parallel
Strand 4	K	102	104	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	71	72	first strand
Strand 2	K	77	78	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	6	7	first strand
Strand 2	L	18	23	anti-parallel
Strand 3	L	78	83	anti-parallel
Strand 4	L	68	73	anti-parallel

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There are 6 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	12	first strand
Strand 2	L	108	112	parallel
Strand 3	L	92	97	anti-parallel
Strand 4	L	34	39	anti-parallel
Strand 5	L	46	51	anti-parallel
Strand 6	L	58	60	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZZ6

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZZ6