Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZZO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ZZO entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 7 chains in PDB entry 9ZZO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 VAL 2SER 113
C
 GLY -1LYS 349
A
 ALA 57CYS 379
A
 ALA 382ALA 382
A
 LEU 386LYS 388
H
 VAL 5PRO 223
L
 SER 1GLU 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 9ZZO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
86 90Right-handed 310
Helix 2
AA2
C
98 109Right-handed alpha
Helix 3
AA3
A
58 88Right-handed alpha
Helix 4
AA4
A
92 122Right-handed alpha
Helix 5
AA5
A
127 161Right-handed alpha
Helix 6
AA6
A
162 170Right-handed alpha
Helix 7
AA7
A
171 196Right-handed alpha
Helix 8
AA8
A
223 237Right-handed alpha
Helix 9
AA9
A
237 255Right-handed alpha
Helix 10
AB1
A
266 299Right-handed alpha
Helix 11
AB2
A
306 333Right-handed alpha
Helix 12
AB3
H
90 94Right-handed 310
Helix 13
AB4
L
80 84Right-handed 310
Helix 14
AB5
L
122 127Right-handed alpha
Helix 15
AB6
L
183 190Right-handed alpha
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There are 18 sheets in PDB entry 9ZZO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 7first strand
Strand 2
E
19 25anti-parallel
Strand 3
E
77 81anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 12first strand
Strand 2
E
108 112parallel
Strand 3
E
92 97anti-parallel
Strand 4
E
34 39anti-parallel
Strand 5
E
45 51anti-parallel
Strand 6
E
57 59anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
112 117first strand
Strand 2
C
37 43anti-parallel
Strand 3
C
18 22anti-parallel
Strand 4
C
7 12anti-parallel
Strand 5
A
382 385anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 28first strand
Strand 2
C
163 171parallel
Strand 3
C
140 151anti-parallel
Strand 4
C
52 62anti-parallel
Strand 5
C
76 87anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 28first strand
Strand 2
C
163 171parallel
Strand 3
C
140 151anti-parallel
Strand 4
C
128 129anti-parallel
Strand 5
C
288 289anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
183 188first strand
Strand 2
C
197 203anti-parallel
Strand 3
C
214 222anti-parallel
Strand 4
C
266 274anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
207 208first strand
Strand 2
C
334 343parallel
Strand 3
C
316 329anti-parallel
Strand 4
C
228 242anti-parallel
Strand 5
C
246 258anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
6 10first strand
Strand 2
H
20 28anti-parallel
Strand 3
H
81 87anti-parallel
Strand 4
H
71 76anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
14 15first strand
Strand 2
H
117 121parallel
Strand 3
H
95 103anti-parallel
Strand 4
H
35 42anti-parallel
Strand 5
H
48 55anti-parallel
Strand 6
H
60 63anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
14 15first strand
Strand 2
H
117 121parallel
Strand 3
H
95 103anti-parallel
Strand 4
H
110 113anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
130 134first strand
Strand 2
H
146 155anti-parallel
Strand 3
H
186 194anti-parallel
Strand 4
H
173 175anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
130 134first strand
Strand 2
H
146 155anti-parallel
Strand 3
H
186 194anti-parallel
Strand 4
H
179 180anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
160 164first strand
Strand 2
H
206 210anti-parallel
Strand 3
H
216 217anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
5 7first strand
Strand 2
L
20 26anti-parallel
Strand 3
L
71 76anti-parallel
Strand 4
L
63 68anti-parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
11 14first strand
Strand 2
L
103 107parallel
Strand 3
L
86 91anti-parallel
Strand 4
L
34 39anti-parallel
Strand 5
L
45 50anti-parallel
Strand 6
L
54 55anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
11 14first strand
Strand 2
L
103 107parallel
Strand 3
L
86 91anti-parallel
Strand 4
L
98 99anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
115 119first strand
Strand 2
L
132 140anti-parallel
Strand 3
L
174 181anti-parallel
Strand 4
L
160 164anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
146 148first strand
Strand 2
L
192 198anti-parallel
Strand 3
L
207 211anti-parallel
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