Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZZR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ZZR entry

There are 12 chains in PDB entry 9ZZR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
R	PRO 22	ASP 336
V	PRO 22	ASP 336
W	PRO 22	LYS 338
O	PRO 22	LYS 338
E	PRO 22	LYS 338
K	PRO 22	LYS 338
J	T 3	T 25
X	ARG 21	CYS 280
D	GLY 2	TRP 314
C	MET 10	ASP 348
B	MET 1	HIS 346
F	PRO 24	ALA 337

There are164 helices in PDB entry 9ZZR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	R	24	29	Right-handed 310
Helix 2	AA2	R	34	44	Right-handed alpha
Helix 3	AA3	R	48	55	Right-handed alpha
Helix 4	AA4	R	56	63	Right-handed alpha
Helix 5	AA5	R	67	82	Right-handed alpha
Helix 6	AA6	R	89	97	Right-handed alpha
Helix 7	AA7	R	106	114	Right-handed alpha
Helix 8	AA8	R	132	144	Right-handed alpha
Helix 9	AA9	R	145	146	Right-handed 310
Helix 10	AB1	R	147	151	Right-handed 310
Helix 11	AB2	R	167	178	Right-handed alpha
Helix 12	AB3	R	181	188	Right-handed alpha
Helix 13	AB4	R	197	211	Right-handed alpha
Helix 14	AB5	R	225	232	Right-handed alpha
Helix 15	AB6	R	238	260	Right-handed alpha
Helix 16	AB7	R	289	294	Right-handed alpha
Helix 17	AB8	V	24	29	Right-handed 310
Helix 18	AB9	V	34	42	Right-handed alpha
Helix 19	AC1	V	48	54	Right-handed alpha
Helix 20	AC2	V	56	63	Right-handed alpha
Helix 21	AC3	V	67	82	Right-handed alpha
Helix 22	AC4	V	89	97	Right-handed alpha
Helix 23	AC5	V	106	114	Right-handed alpha
Helix 24	AC6	V	132	144	Right-handed alpha
Helix 25	AC7	V	145	146	Right-handed 310
Helix 26	AC8	V	147	151	Right-handed 310
Helix 27	AC9	V	167	179	Right-handed alpha
Helix 28	AD1	V	181	188	Right-handed alpha
Helix 29	AD2	V	196	212	Right-handed alpha
Helix 30	AD3	V	225	232	Right-handed alpha
Helix 31	AD4	V	238	260	Right-handed alpha
Helix 32	AD5	V	288	296	Right-handed alpha
Helix 33	AD6	W	27	31	Right-handed 310
Helix 34	AD7	W	34	45	Right-handed alpha
Helix 35	AD8	W	48	54	Right-handed alpha
Helix 36	AD9	W	56	62	Right-handed alpha
Helix 37	AE1	W	67	82	Right-handed alpha
Helix 38	AE2	W	88	98	Right-handed alpha
Helix 39	AE3	W	106	114	Right-handed alpha
Helix 40	AE4	W	132	144	Right-handed alpha
Helix 41	AE5	W	147	151	Right-handed 310
Helix 42	AE6	W	167	179	Right-handed alpha
Helix 43	AE7	W	182	187	Right-handed alpha
Helix 44	AE8	W	196	214	Right-handed alpha
Helix 45	AE9	W	225	232	Right-handed alpha
Helix 46	AF1	W	237	260	Right-handed alpha
Helix 47	AF2	W	288	296	Right-handed alpha
Helix 48	AF3	O	27	32	Right-handed 310
Helix 49	AF4	O	34	45	Right-handed alpha
Helix 50	AF5	O	48	54	Right-handed alpha
Helix 51	AF6	O	56	63	Right-handed alpha
Helix 52	AF7	O	67	82	Right-handed alpha
Helix 53	AF8	O	88	98	Right-handed alpha
Helix 54	AF9	O	106	113	Right-handed alpha
Helix 55	AG1	O	134	144	Right-handed alpha
Helix 56	AG2	O	145	146	Right-handed 310
Helix 57	AG3	O	147	151	Right-handed 310
Helix 58	AG4	O	167	179	Right-handed alpha
Helix 59	AG5	O	181	185	Right-handed 310
Helix 60	AG6	O	196	214	Right-handed alpha
Helix 61	AG7	O	225	232	Right-handed alpha
Helix 62	AG8	O	237	260	Right-handed alpha
Helix 63	AG9	O	288	296	Right-handed alpha
Helix 64	AH1	E	27	31	Right-handed 310
Helix 65	AH2	E	34	45	Right-handed alpha
Helix 66	AH3	E	48	54	Right-handed alpha
Helix 67	AH4	E	56	62	Right-handed alpha
Helix 68	AH5	E	67	82	Right-handed alpha
Helix 69	AH6	E	88	98	Right-handed alpha
Helix 70	AH7	E	106	114	Right-handed alpha
Helix 71	AH8	E	132	144	Right-handed alpha
Helix 72	AH9	E	167	179	Right-handed alpha
Helix 73	AI1	E	196	214	Right-handed alpha
Helix 74	AI2	E	225	232	Right-handed alpha
Helix 75	AI3	E	237	260	Right-handed alpha
Helix 76	AI4	E	288	296	Right-handed alpha
Helix 77	AI5	K	24	31	Right-handed 310
Helix 78	AI6	K	34	45	Right-handed alpha
Helix 79	AI7	K	48	54	Right-handed alpha
Helix 80	AI8	K	56	63	Right-handed alpha
Helix 81	AI9	K	67	82	Right-handed alpha
Helix 82	AJ1	K	89	98	Right-handed alpha
Helix 83	AJ2	K	106	114	Right-handed alpha
Helix 84	AJ3	K	134	144	Right-handed alpha
Helix 85	AJ4	K	147	151	Right-handed 310
Helix 86	AJ5	K	167	179	Right-handed alpha
Helix 87	AJ6	K	196	214	Right-handed alpha
Helix 88	AJ7	K	225	232	Right-handed alpha
Helix 89	AJ8	K	237	260	Right-handed alpha
Helix 90	AJ9	K	288	296	Right-handed alpha
Helix 91	AK1	X	23	28	Right-handed alpha
Helix 92	AK2	X	53	67	Right-handed alpha
Helix 93	AK3	X	88	100	Right-handed alpha
Helix 94	AK4	X	104	113	Right-handed alpha
Helix 95	AK5	X	122	140	Right-handed alpha
Helix 96	AK6	X	154	163	Right-handed alpha
Helix 97	AK7	X	165	188	Right-handed alpha
Helix 98	AK8	X	228	233	Right-handed alpha
Helix 99	AK9	D	13	23	Right-handed alpha
Helix 100	AL1	D	27	34	Right-handed alpha
Helix 101	AL2	D	35	44	Right-handed alpha
Helix 102	AL3	D	46	62	Right-handed alpha
Helix 103	AL4	D	68	79	Right-handed alpha
Helix 104	AL5	D	112	127	Right-handed alpha
Helix 105	AL6	D	142	154	Right-handed alpha
Helix 106	AL7	D	156	166	Right-handed alpha
Helix 107	AL8	D	174	192	Right-handed alpha
Helix 108	AL9	D	207	213	Right-handed alpha
Helix 109	AM1	D	221	240	Right-handed alpha
Helix 110	AM2	D	264	269	Right-handed alpha
Helix 111	AM3	D	312	314	Right-handed 310
Helix 112	AM4	C	20	31	Right-handed alpha
Helix 113	AM5	C	34	40	Right-handed alpha
Helix 114	AM6	C	42	51	Right-handed alpha
Helix 115	AM7	C	53	67	Right-handed alpha
Helix 116	AM8	C	87	97	Right-handed alpha
Helix 117	AM9	C	104	111	Right-handed alpha
Helix 118	AN1	C	130	143	Right-handed alpha
Helix 119	AN2	C	145	149	Right-handed 310
Helix 120	AN3	C	165	187	Right-handed alpha
Helix 121	AN4	C	190	197	Right-handed alpha
Helix 122	AN5	C	200	207	Right-handed alpha
Helix 123	AN6	C	215	233	Right-handed alpha
Helix 124	AN7	C	244	250	Right-handed alpha
Helix 125	AN8	C	254	277	Right-handed alpha
Helix 126	AN9	C	290	294	Right-handed 310
Helix 127	AO1	C	303	308	Right-handed 310
Helix 128	AO2	B	2	6	Right-handed alpha
Helix 129	AO3	B	9	20	Right-handed alpha
Helix 130	AO4	B	24	29	Right-handed alpha
Helix 131	AO5	B	31	40	Right-handed alpha
Helix 132	AO6	B	42	58	Right-handed alpha
Helix 133	AO7	B	64	71	Right-handed alpha
Helix 134	AO8	B	75	80	Right-handed alpha
Helix 135	AO9	B	86	93	Right-handed alpha
Helix 136	AP1	B	112	124	Right-handed alpha
Helix 137	AP2	B	125	126	Right-handed 310
Helix 138	AP3	B	127	131	Right-handed 310
Helix 139	AP4	B	147	157	Right-handed alpha
Helix 140	AP5	B	157	162	Right-handed alpha
Helix 141	AP6	B	166	173	Right-handed alpha
Helix 142	AP7	B	175	177	Right-handed 310
Helix 143	AP8	B	186	204	Right-handed alpha
Helix 144	AP9	B	215	223	Right-handed alpha
Helix 145	AQ1	B	227	250	Right-handed alpha
Helix 146	AQ2	B	285	291	Right-handed alpha
Helix 147	AQ3	F	25	30	Right-handed alpha
Helix 148	AQ4	F	36	43	Right-handed alpha
Helix 149	AQ5	F	48	52	Right-handed 310
Helix 150	AQ6	F	56	63	Right-handed alpha
Helix 151	AQ7	F	67	78	Right-handed alpha
Helix 152	AQ8	F	79	81	Right-handed 310
Helix 153	AQ9	F	89	96	Right-handed alpha
Helix 154	AR1	F	97	99	Right-handed 310
Helix 155	AR2	F	106	113	Right-handed alpha
Helix 156	AR3	F	132	144	Right-handed alpha
Helix 157	AR4	F	145	146	Right-handed 310
Helix 158	AR5	F	147	151	Right-handed 310
Helix 159	AR6	F	167	179	Right-handed alpha
Helix 160	AR7	F	181	188	Right-handed alpha
Helix 161	AR8	F	196	214	Right-handed alpha
Helix 162	AR9	F	225	232	Right-handed alpha
Helix 163	AS1	F	236	260	Right-handed alpha
Helix 164	AS2	F	289	296	Right-handed alpha

There are 16 sheets in PDB entry 9ZZR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	87	88	first strand
Strand 2	F	189	193	anti-parallel
Strand 3	F	157	161	parallel
Strand 4	F	218	221	parallel
Strand 5	F	262	267	parallel
Strand 6	F	122	127	parallel
Strand 7	F	298	304	parallel
Strand 8	F	310	316	anti-parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	333	335	first strand
Strand 2	R	324	330	anti-parallel
Strand 3	R	309	315	anti-parallel
Strand 4	R	298	304	anti-parallel
Strand 5	R	122	127	parallel
Strand 6	R	263	268	parallel
Strand 7	R	216	221	parallel
Strand 8	R	156	161	parallel
Strand 9	R	190	193	parallel
Strand 10	V	87	88	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	190	193	first strand
Strand 2	V	156	161	parallel
Strand 3	V	216	221	parallel
Strand 4	V	263	266	parallel
Strand 5	V	122	126	parallel
Strand 6	V	299	304	parallel
Strand 7	V	309	315	anti-parallel
Strand 8	V	324	329	anti-parallel
Strand 9	V	334	335	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	190	193	first strand
Strand 2	W	156	161	parallel
Strand 3	W	216	222	parallel
Strand 4	W	262	267	parallel
Strand 5	W	122	126	parallel
Strand 6	W	298	302	parallel
Strand 7	W	309	315	anti-parallel
Strand 8	W	324	330	anti-parallel
Strand 9	W	333	334	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	333	335	first strand
Strand 2	O	324	330	anti-parallel
Strand 3	O	309	315	anti-parallel
Strand 4	O	298	304	anti-parallel
Strand 5	O	122	126	parallel
Strand 6	O	262	267	parallel
Strand 7	O	218	222	parallel
Strand 8	O	158	161	parallel
Strand 9	O	190	193	parallel
Strand 10	K	87	88	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	190	193	first strand
Strand 2	E	156	161	parallel
Strand 3	E	216	221	parallel
Strand 4	E	262	267	parallel
Strand 5	E	122	126	parallel
Strand 6	E	298	302	parallel
Strand 7	E	309	315	anti-parallel
Strand 8	E	324	330	anti-parallel
Strand 9	E	333	335	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	190	193	first strand
Strand 2	K	156	161	parallel
Strand 3	K	216	222	parallel
Strand 4	K	262	267	parallel
Strand 5	K	122	127	parallel
Strand 6	K	298	302	parallel
Strand 7	K	309	315	anti-parallel
Strand 8	K	324	330	anti-parallel
Strand 9	K	333	335	anti-parallel

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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	276	279	first strand
Strand 2	X	265	273	anti-parallel
Strand 3	X	252	259	anti-parallel
Strand 4	X	237	243	anti-parallel
Strand 5	X	42	48	parallel
Strand 6	X	190	196	parallel
Strand 7	X	143	147	parallel
Strand 8	X	77	82	parallel
Strand 9	X	115	119	parallel
Strand 10	D	66	67	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	260	262	first strand
Strand 2	D	244	253	anti-parallel
Strand 3	D	102	107	parallel
Strand 4	D	274	280	parallel
Strand 5	D	290	297	anti-parallel
Strand 6	D	306	310	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	260	262	first strand
Strand 2	D	244	253	anti-parallel
Strand 3	D	200	205	parallel
Strand 4	D	131	136	parallel
Strand 5	D	167	171	parallel
Strand 6	C	85	86	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	208	212	first strand
Strand 2	C	154	159	parallel
Strand 3	C	236	242	parallel
Strand 4	C	279	288	parallel
Strand 5	C	297	299	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	208	212	first strand
Strand 2	C	154	159	parallel
Strand 3	C	236	242	parallel
Strand 4	C	279	288	parallel
Strand 5	C	120	125	parallel
Strand 6	C	311	317	parallel
Strand 7	C	322	328	anti-parallel
Strand 8	C	337	338	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	340	342	first strand
Strand 2	C	345	347	anti-parallel

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There are 10 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	337	339	first strand
Strand 2	B	327	332	anti-parallel
Strand 3	B	313	319	anti-parallel
Strand 4	B	292	299	anti-parallel
Strand 5	B	102	106	parallel
Strand 6	B	253	257	parallel
Strand 7	B	207	213	parallel
Strand 8	B	136	141	parallel
Strand 9	B	179	183	parallel
Strand 10	F	87	88	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	269	271	first strand
Strand 2	F	284	286	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	328	329	first strand
Strand 2	F	334	335	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ZZR

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ZZR