Analysis of Ligand-Protein Contacts in PDB entry:
11YO

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 198 ligands in PDB entry 11YO. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	FME	I	1	10	N-FORMYLMETHIONINE
lig 2	FME	M	1	10	N-FORMYLMETHIONINE
lig 3	FME	T	1	10	N-FORMYLMETHIONINE
lig 4	FME	i	1	10	N-FORMYLMETHIONINE
lig 5	FME	m	1	10	N-FORMYLMETHIONINE
lig 6	FME	t	1	10	N-FORMYLMETHIONINE
lig 7	FE2	A	401	1	FE (II) ION
lig 8	CLA	A	402	65	CHLOROPHYLL A
lig 9	CLA	A	403	65	CHLOROPHYLL A
lig 10	CLA	A	404	54	CHLOROPHYLL A
lig 11	BCR	A	405	40	BETA-CAROTENE
lig 12	CL	A	406	1	CHLORIDE ION
lig 13	CL	A	407	1	CHLORIDE ION
lig 14	PL9	A	408	55	BENZOQUINONE
lig 15	SQD	A	409	52	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 16	SQD	A	410	39	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 17	DGD	A	411	66	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 18	STE	A	412	5	STEARIC ACID
lig 19	OEX	A	413	10	CA-MN4-O5 CLUSTER
lig 20	STE	B	701	12	STEARIC ACID
lig 21	CLA	B	702	65	CHLOROPHYLL A
lig 22	CLA	B	703	65	CHLOROPHYLL A
lig 23	CLA	B	704	65	CHLOROPHYLL A
lig 24	CLA	B	705	65	CHLOROPHYLL A
lig 25	CLA	B	706	65	CHLOROPHYLL A
lig 26	CLA	B	707	65	CHLOROPHYLL A
lig 27	CLA	B	708	65	CHLOROPHYLL A
lig 28	CLA	B	709	65	CHLOROPHYLL A
lig 29	CLA	B	710	65	CHLOROPHYLL A
lig 30	CLA	B	711	65	CHLOROPHYLL A
lig 31	CLA	B	712	65	CHLOROPHYLL A
lig 32	CLA	B	713	65	CHLOROPHYLL A
lig 33	CLA	B	714	65	CHLOROPHYLL A
lig 34	CLA	B	715	65	CHLOROPHYLL A
lig 35	CLA	B	716	60	CHLOROPHYLL A
lig 36	BCR	B	717	40	BETA-CAROTENE
lig 37	BCR	B	718	40	BETA-CAROTENE
lig 38	BCR	B	719	40	BETA-CAROTENE
lig 39	STE	B	720	17	STEARIC ACID
lig 40	LMG	B	721	28	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 41	LHG	B	722	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 42	SQD	B	723	54	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 43	STE	B	724	12	STEARIC ACID
lig 44	STE	B	725	18	STEARIC ACID
lig 45	STE	B	726	16	STEARIC ACID
lig 46	CLA	B	727	65	CHLOROPHYLL A
lig 47	BCR	C	501	40	BETA-CAROTENE
lig 48	CLA	C	502	65	CHLOROPHYLL A
lig 49	CLA	C	503	65	CHLOROPHYLL A
lig 50	CLA	C	504	65	CHLOROPHYLL A
lig 51	CLA	C	505	59	CHLOROPHYLL A
lig 52	CLA	C	506	65	CHLOROPHYLL A
lig 53	CLA	C	507	65	CHLOROPHYLL A
lig 54	CLA	C	508	65	CHLOROPHYLL A
lig 55	CLA	C	509	65	CHLOROPHYLL A
lig 56	CLA	C	510	65	CHLOROPHYLL A
lig 57	CLA	C	511	65	CHLOROPHYLL A
lig 58	CLA	C	512	65	CHLOROPHYLL A
lig 59	CLA	C	513	65	CHLOROPHYLL A
lig 60	CLA	C	514	65	CHLOROPHYLL A
lig 61	BCR	C	515	40	BETA-CAROTENE
lig 62	LMG	C	516	48	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 63	DGD	C	517	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 64	DGD	C	518	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 65	DGD	C	519	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 66	LMG	C	520	48	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 67	STE	C	521	12	STEARIC ACID
lig 68	STE	C	522	16	STEARIC ACID
lig 69	STE	C	523	12	STEARIC ACID
lig 70	BCR	C	524	40	BETA-CAROTENE
lig 71	BCT	D	401	4	BICARBONATE ION
lig 72	CLA	D	402	65	CHLOROPHYLL A
lig 73	CLA	D	403	65	CHLOROPHYLL A
lig 74	CLA	D	404	65	CHLOROPHYLL A
lig 75	BCR	D	405	40	BETA-CAROTENE
lig 76	PL9	D	406	55	BENZOQUINONE
lig 77	PHO	D	407	64	PHEOPHYTIN A
lig 78	PHO	D	408	64	PHEOPHYTIN A
lig 79	LMG	D	409	51	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 80	SQD	D	410	36	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 81	LHG	D	411	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 82	LHG	D	412	47	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 83	LMG	D	413	32	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 84	LHG	E	101	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 85	STE	E	102	12	STEARIC ACID
lig 86	STE	E	103	7	STEARIC ACID
lig 87	HEC	F	101	43	HEME C
lig 88	BCR	H	101	40	BETA-CAROTENE
lig 89	DGD	H	102	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 90	STE	H	103	18	STEARIC ACID
lig 91	STE	H	104	8	STEARIC ACID
lig 92	STE	I	101	15	STEARIC ACID
lig 93	STE	J	101	12	STEARIC ACID
lig 94	LHG	L	101	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 95	LMG	M	101	51	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 96	STE	M	102	15	STEARIC ACID
lig 97	STE	M	103	10	STEARIC ACID
lig 98	BCR	T	701	40	BETA-CAROTENE
lig 99	STE	T	702	15	STEARIC ACID
lig 100	HEC	V	201	43	HEME C
lig 101	STE	X	101	20	STEARIC ACID
lig 102	BCR	Y	101	40	BETA-CAROTENE
lig 103	STE	Z	101	8	STEARIC ACID
lig 104	FE2	a	401	1	FE (II) ION
lig 105	CLA	a	402	65	CHLOROPHYLL A
lig 106	CLA	a	403	65	CHLOROPHYLL A
lig 107	PHO	a	404	64	PHEOPHYTIN A
lig 108	CLA	a	405	65	CHLOROPHYLL A
lig 109	BCR	a	406	40	BETA-CAROTENE
lig 110	CL	a	407	1	CHLORIDE ION
lig 111	CL	a	408	1	CHLORIDE ION
lig 112	BCT	a	409	4	BICARBONATE ION
lig 113	PL9	a	410	55	BENZOQUINONE
lig 114	LHG	a	411	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 115	SQD	a	412	54	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 116	LHG	a	413	42	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 117	SQD	a	414	36	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 118	STE	a	415	10	STEARIC ACID
lig 119	STE	a	416	12	STEARIC ACID
lig 120	STE	a	417	15	STEARIC ACID
lig 121	LMG	a	418	55	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 122	OEX	a	419	10	CA-MN4-O5 CLUSTER
lig 123	STE	b	601	16	STEARIC ACID
lig 124	CLA	b	602	65	CHLOROPHYLL A
lig 125	CLA	b	603	65	CHLOROPHYLL A
lig 126	CLA	b	604	65	CHLOROPHYLL A
lig 127	CLA	b	605	65	CHLOROPHYLL A
lig 128	CLA	b	606	65	CHLOROPHYLL A
lig 129	CLA	b	607	65	CHLOROPHYLL A
lig 130	CLA	b	608	65	CHLOROPHYLL A
lig 131	CLA	b	609	65	CHLOROPHYLL A
lig 132	CLA	b	610	65	CHLOROPHYLL A
lig 133	CLA	b	611	65	CHLOROPHYLL A
lig 134	CLA	b	612	65	CHLOROPHYLL A
lig 135	CLA	b	613	65	CHLOROPHYLL A
lig 136	CLA	b	614	65	CHLOROPHYLL A
lig 137	CLA	b	615	65	CHLOROPHYLL A
lig 138	CLA	b	616	60	CHLOROPHYLL A
lig 139	BCR	b	617	40	BETA-CAROTENE
lig 140	BCR	b	618	40	BETA-CAROTENE
lig 141	BCR	b	619	40	BETA-CAROTENE
lig 142	LMG	b	620	51	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 143	STE	b	621	20	STEARIC ACID
lig 144	LMG	b	622	55	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 145	STE	b	623	16	STEARIC ACID
lig 146	STE	b	624	20	STEARIC ACID
lig 147	STE	b	625	10	STEARIC ACID
lig 148	STE	c	501	12	STEARIC ACID
lig 149	CLA	c	502	65	CHLOROPHYLL A
lig 150	CLA	c	503	65	CHLOROPHYLL A
lig 151	CLA	c	504	65	CHLOROPHYLL A
lig 152	CLA	c	505	60	CHLOROPHYLL A
lig 153	CLA	c	506	65	CHLOROPHYLL A
lig 154	CLA	c	507	65	CHLOROPHYLL A
lig 155	CLA	c	508	65	CHLOROPHYLL A
lig 156	CLA	c	509	64	CHLOROPHYLL A
lig 157	CLA	c	510	65	CHLOROPHYLL A
lig 158	CLA	c	511	65	CHLOROPHYLL A
lig 159	CLA	c	512	65	CHLOROPHYLL A
lig 160	CLA	c	513	65	CHLOROPHYLL A
lig 161	CLA	c	514	65	CHLOROPHYLL A
lig 162	BCR	c	515	40	BETA-CAROTENE
lig 163	BCR	c	516	40	BETA-CAROTENE
lig 164	DGD	c	517	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 165	DGD	c	518	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 166	DGD	c	519	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 167	LMG	c	520	37	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 168	STE	c	521	20	STEARIC ACID
lig 169	LMG	c	522	48	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 170	LMG	c	523	49	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 171	CLA	d	401	65	CHLOROPHYLL A
lig 172	STE	d	402	20	STEARIC ACID
lig 173	CLA	d	403	65	CHLOROPHYLL A
lig 174	CLA	d	404	65	CHLOROPHYLL A
lig 175	BCR	d	405	40	BETA-CAROTENE
lig 176	PL9	d	406	55	BENZOQUINONE
lig 177	PHO	d	407	64	PHEOPHYTIN A
lig 178	LHG	d	408	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 179	LHG	d	409	39	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 180	LMG	d	410	44	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 181	STE	d	411	17	STEARIC ACID
lig 182	HEC	f	101	43	HEME C
lig 183	SQD	f	102	41	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 184	CLA	h	701	65	CHLOROPHYLL A
lig 185	BCR	h	702	40	BETA-CAROTENE
lig 186	DGD	h	703	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 187	STE	h	704	14	STEARIC ACID
lig 188	STE	j	101	12	STEARIC ACID
lig 189	BCR	k	101	40	BETA-CAROTENE
lig 190	BCR	k	102	40	BETA-CAROTENE
lig 191	SQD	l	101	49	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 192	LHG	l	102	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 193	STE	m	101	18	STEARIC ACID
lig 194	STE	m	102	12	STEARIC ACID
lig 195	BCR	t	701	40	BETA-CAROTENE
lig 196	STE	t	702	14	STEARIC ACID
lig 197	HEC	v	201	43	HEME C
lig 198	STE	x	101	20	STEARIC ACID

Analysis of Ligand-Protein Contacts in PDB entry: 11YO

Analysis of Ligand-Protein Contacts in PDB entry:
11YO