Analysis of Ligand-Protein Contacts in PDB entry:
13DT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 13DT. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
EDO
A
301 41,2-ETHANEDIOL
lig 2
EDO
A
302 41,2-ETHANEDIOL
lig 3
EDO
A
303 41,2-ETHANEDIOL
lig 4
EDO
A
304 41,2-ETHANEDIOL
lig 5
EDO
A
305 41,2-ETHANEDIOL
lig 6
EDO
A
306 41,2-ETHANEDIOL
lig 7
EDO
A
307 41,2-ETHANEDIOL
lig 8
PEG
A
308 7DI(HYDROXYETHYL)ETHER
lig 9
EDO
A
309 41,2-ETHANEDIOL
lig 10
EDO
A
310 41,2-ETHANEDIOL
lig 11
EDO
A
311 41,2-ETHANEDIOL
lig 12
NA
A
312 1SODIUM ION
lig 13
EDO
B
301 41,2-ETHANEDIOL
lig 14
EDO
B
302 41,2-ETHANEDIOL
lig 15
EDO
B
303 41,2-ETHANEDIOL
lig 16
EDO
B
304 41,2-ETHANEDIOL
lig 17
EDO
B
305 41,2-ETHANEDIOL
lig 18
EDO
B
306 41,2-ETHANEDIOL
lig 19
EDO
B
307 41,2-ETHANEDIOL
lig 20
EDO
B
308 41,2-ETHANEDIOL
lig 21
EDO
B
309 41,2-ETHANEDIOL
lig 22
EDO
B
310 41,2-ETHANEDIOL
lig 23
EDO
B
311 41,2-ETHANEDIOL
lig 24
EDO
B
312 41,2-ETHANEDIOL
lig 25
EDO
B
313 41,2-ETHANEDIOL
lig 26
NA
B
314 1SODIUM ION
lig 27
NA
B
315 1SODIUM ION
lig 28
NA
B
316 1SODIUM ION
lig 29
NAG
C
201 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
EDO
C
202 41,2-ETHANEDIOL
lig 31
EDO
C
203 41,2-ETHANEDIOL
lig 32
EDO
C
204 41,2-ETHANEDIOL
lig 33
CIT
C
205 10CITRIC ACID