Analysis of Ligand-Protein Contacts in PDB entry:
1ALM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 46 ligands in PDB entry 1ALM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TYR
A
844 1TYROSINE
lig 2
ARG
A
845 1ARGININE
lig 3
ALA
A
846 1ALANINE
lig 4
MET
A
847 1METHIONINE
lig 5
VAL
A
848 1VALINE
lig 6
GLU
A
849 1GLUTAMIC ACID
lig 7
ARG
A
850 1ARGININE
lig 8
ARG
A
851 1ARGININE
lig 9
GLU
A
852 1GLUTAMIC ACID
lig 10
SER
A
853 1SERINE
lig 11
ILE
A
854 1ISOLEUCINE
lig 12
PHE
A
855 1PHENYLALANINE
lig 13
CYS
A
856 1CYSTEINE
lig 14
ILE
A
857 1ISOLEUCINE
lig 15
GLN
A
858 1GLUTAMINE
lig 16
TYR
A
859 1TYROSINE
lig 17
ASN
A
860 1ASPARAGINE
lig 18
VAL
A
861 1VALINE
lig 19
ARG
A
862 1ARGININE
lig 20
SER
A
863 1SERINE
lig 21
PHE
A
864 1PHENYLALANINE
lig 22
MET
A
865 1METHIONINE
lig 23
ASN
A
866 1ASPARAGINE
lig 24
VAL
A
867 1VALINE
lig 25
LYS
A
868 1LYSINE
lig 26
HIS
A
869 1HISTIDINE
lig 27
TRP
A
870 1TRYPTOPHAN
lig 28
PRO
A
871 1PROLINE
lig 29
TRP
A
872 1TRYPTOPHAN
lig 30
MET
A
873 1METHIONINE
lig 31
LYS
A
874 1LYSINE
lig 32
LEU
A
875 1LEUCINE
lig 33
PHE
A
876 1PHENYLALANINE
lig 34
PHE
A
877 1PHENYLALANINE
lig 35
LYS
A
878 1LYSINE
lig 36
ILE
A
879 1ISOLEUCINE
lig 37
LYS
A
880 1LYSINE
lig 38
PRO
A
881 1PROLINE
lig 39
LEU
A
882 1LEUCINE
lig 40
LEU
A
883 1LEUCINE
lig 41
LYS
A
884 1LYSINE
lig 42
ATP
V
373 29ADENOSINE-5'-TRIPHOSPHATE
lig 43
ATP
W
373 31ADENOSINE-5'-TRIPHOSPHATE
lig 44
ATP
X
373 31ADENOSINE-5'-TRIPHOSPHATE
lig 45
ATP
Y
373 31ADENOSINE-5'-TRIPHOSPHATE
lig 46
ATP
Z
373 31ADENOSINE-5'-TRIPHOSPHATE