Analysis of Ligand-Protein Contacts in PDB entry:
1BYZ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 1BYZ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
A
100 3ACETYL GROUP
lig 2
ACE
B
200 3ACETYL GROUP
lig 3
ACE
C
300 3ACETYL GROUP
lig 4
ACE
D
400 3ACETYL GROUP
lig 5
ETA
A
502 4ETHANOLAMINE
lig 6
MPD
A
513 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 7
MPD
B
511 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 8
CL
C
520 1CHLORIDE ION
lig 9
ETA
C
501 4ETHANOLAMINE
lig 10
MRD
D
510 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 11
MPD
D
512 8(4S)-2-METHYL-2,4-PENTANEDIOL