Analysis of Ligand-Protein Contacts in PDB entry:
1D7W


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 49 ligands in PDB entry 1D7W. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CSO
C
150 7S-HYDROXYCYSTEINE
lig 2
CSO
D
150 7S-HYDROXYCYSTEINE
lig 3
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 8
FUC
E
6 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 14
FUC
F
6 10ALPHA-L-FUCOPYRANOSE
lig 15
BR
A
1601 1BROMIDE ION
lig 16
SO4
A
1602 5SULFATE ION
lig 17
CYN
A
1844 2CYANIDE ION
lig 18
ACT
A
2608 4ACETATE ION
lig 19
HEM
A
605 43PROTOPORPHYRIN IX CONTAINING FE
lig 20
NAG
C
1620 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
C
1630 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
CA
C
1600 1CALCIUM ION
lig 23
SO4
C
1603 5SULFATE ION
lig 24
SO4
C
1610 5SULFATE ION
lig 25
ACT
C
1606 4ACETATE ION
lig 26
ACT
C
1604 4ACETATE ION
lig 27
ACT
C
1607 4ACETATE ION
lig 28
ACT
C
1609 4ACETATE ION
lig 29
ACT
C
1612 4ACETATE ION
lig 30
BR
C
758 1BROMIDE ION
lig 31
BR
C
889 1BROMIDE ION
lig 32
BR
C
957 1BROMIDE ION
lig 33
ACT
B
1608 4ACETATE ION
lig 34
BR
B
2601 1BROMIDE ION
lig 35
SO4
B
2602 5SULFATE ION
lig 36
ACT
B
2611 4ACETATE ION
lig 37
CYN
B
2844 2CYANIDE ION
lig 38
HEM
B
605 43PROTOPORPHYRIN IX CONTAINING FE
lig 39
NAG
D
2620 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
D
2630 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
CA
D
2600 1CALCIUM ION
lig 42
SO4
D
2610 5SULFATE ION
lig 43
ACT
D
2606 4ACETATE ION
lig 44
ACT
D
2604 4ACETATE ION
lig 45
ACT
D
2607 4ACETATE ION
lig 46
ACT
D
2609 4ACETATE ION
lig 47
BR
D
758 1BROMIDE ION
lig 48
BR
D
889 1BROMIDE ION
lig 49
BR
D
957 1BROMIDE ION