Analysis of Ligand-Protein Contacts in PDB entry:
1DD0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 1DD0. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
661 14N-ACETYL-D-GLUCOSAMINE
lig 2
NAG
C
662 14N-ACETYL-D-GLUCOSAMINE
lig 3
NAG
D
671 14N-ACETYL-D-GLUCOSAMINE
lig 4
NAG
D
672 14N-ACETYL-D-GLUCOSAMINE
lig 5
MAN
D
673 11ALPHA-D-MANNOSE
lig 6
MAN
D
674 11ALPHA-D-MANNOSE
lig 7
NAG
A
681 14N-ACETYL-D-GLUCOSAMINE
lig 8
NAG
E
2661 14N-ACETYL-D-GLUCOSAMINE
lig 9
NAG
E
2662 14N-ACETYL-D-GLUCOSAMINE
lig 10
NAG
F
2671 14N-ACETYL-D-GLUCOSAMINE
lig 11
NAG
F
2672 14N-ACETYL-D-GLUCOSAMINE
lig 12
MAN
F
2673 11ALPHA-D-MANNOSE
lig 13
MAN
F
2674 11ALPHA-D-MANNOSE
lig 14
NAG
B
2681 14N-ACETYL-D-GLUCOSAMINE
lig 15
BOG

702 20B-OCTYLGLUCOSIDE
lig 16
BOG

703 20B-OCTYLGLUCOSIDE
lig 17
BOG

704 20B-OCTYLGLUCOSIDE
lig 18
BOG

2702 20B-OCTYLGLUCOSIDE
lig 19
BOG

2704 20B-OCTYLGLUCOSIDE
lig 20
PGX

701 26 BICYCLO[2.2.1]HEPT-5-YL]-HEPT-5-ENOIC ACI
lig 21
PGX

2701 26 BICYCLO[2.2.1]HEPT-5-YL]-HEPT-5-ENOIC ACI