Analysis of Ligand-Protein Contacts in PDB entry:
1IPO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 1IPO. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OMG
A
1207 1O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 2
2MG
C
1810 12N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 3
H2U
C
1816 15,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 4
H2U
C
1817 15,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 5
M2G
C
1826 1N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 6
OMC
C
1832 1O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 7
OMG
C
1834 1O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 8
YG
C
1837 1WYBUTOSINE
lig 9
PSU
C
1839 1PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 10
5MC
C
1840 15-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 11
5MC
C
1865 15-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 12
5MU
C
1870 15-METHYLURIDINE 5'-MONOPHOSPHATE
lig 13
PSU
C
1871 1PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 14
1MA
C
1874 16-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 15
GTP
1000 3GUANOSINE-5'-TRIPHOSPHATE
lig 16
CYS
2000 1CYSTEINE