Analysis of Ligand-Protein Contacts in PDB entry:
1JDF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 1JDF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
A
4500 1MAGNESIUM ION
lig 2
GLR
A
2510 132,3-DIHYDROXY-5-OXO-HEXANEDIOATE
lig 3
IPA
A
3603 4ISOPROPYL ALCOHOL
lig 4
IPA
A
3605 4ISOPROPYL ALCOHOL
lig 5
MG
B
4501 1MAGNESIUM ION
lig 6
GLR
B
2511 132,3-DIHYDROXY-5-OXO-HEXANEDIOATE
lig 7
IPA
B
3604 4ISOPROPYL ALCOHOL
lig 8
IPA
B
3606 4ISOPROPYL ALCOHOL
lig 9
MG
C
4502 1MAGNESIUM ION
lig 10
GLR
C
2512 132,3-DIHYDROXY-5-OXO-HEXANEDIOATE
lig 11
IPA
C
3601 4ISOPROPYL ALCOHOL
lig 12
IPA
C
3607 4ISOPROPYL ALCOHOL
lig 13
MG
D
4503 1MAGNESIUM ION
lig 14
GLR
D
2513 132,3-DIHYDROXY-5-OXO-HEXANEDIOATE
lig 15
IPA
D
3602 4ISOPROPYL ALCOHOL
lig 16
IPA
D
3608 4ISOPROPYL ALCOHOL