Analysis of Ligand-Protein Contacts in PDB entry:
1JED


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 52 ligands in PDB entry 1JED. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CD
A
512 1CADMIUM ION
lig 2
CD
A
513 1CADMIUM ION
lig 3
CD
A
514 1CADMIUM ION
lig 4
CD
A
515 1CADMIUM ION
lig 5
CD
A
516 1CADMIUM ION
lig 6
CA
A
517 1CALCIUM ION
lig 7
NA
A
518 1SODIUM ION
lig 8
CA
A
519 1CALCIUM ION
lig 9
CA
A
520 1CALCIUM ION
lig 10
MG
A
521 1MAGNESIUM ION
lig 11
NA
A
522 1SODIUM ION
lig 12
NA
A
523 1SODIUM ION
lig 13
CD
A
524 1CADMIUM ION
lig 14
NA
A
525 1SODIUM ION
lig 15
NA
A
526 1SODIUM ION
lig 16
NA
A
527 1SODIUM ION
lig 17
MG
A
539 1MAGNESIUM ION
lig 18
ADP
A
635 27ADENOSINE-5'-DIPHOSPHATE
lig 19
TRS
A
1415 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 20
ACY
A
551 4ACETIC ACID
lig 21
ACY
A
552 4ACETIC ACID
lig 22
ACY
A
553 4ACETIC ACID
lig 23
ACY
A
554 4ACETIC ACID
lig 24
ACY
A
555 4ACETIC ACID
lig 25
ACY
A
556 4ACETIC ACID
lig 26
ACY
A
557 4ACETIC ACID
lig 27
ACY
A
565 4ACETIC ACID
lig 28
CD
B
530 1CADMIUM ION
lig 29
CD
B
531 1CADMIUM ION
lig 30
CD
B
532 1CADMIUM ION
lig 31
CD
B
533 1CADMIUM ION
lig 32
CD
B
534 1CADMIUM ION
lig 33
CA
B
535 1CALCIUM ION
lig 34
NA
B
540 1SODIUM ION
lig 35
CA
B
537 1CALCIUM ION
lig 36
CA
B
538 1CALCIUM ION
lig 37
MG
B
547 1MAGNESIUM ION
lig 38
NA
B
541 1SODIUM ION
lig 39
NA
B
542 1SODIUM ION
lig 40
NA
B
543 1SODIUM ION
lig 41
NA
B
544 1SODIUM ION
lig 42
NA
B
545 1SODIUM ION
lig 43
MG
B
546 1MAGNESIUM ION
lig 44
ADP
B
636 27ADENOSINE-5'-DIPHOSPHATE
lig 45
TRS
B
1416 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 46
ACY
B
558 4ACETIC ACID
lig 47
ACY
B
559 4ACETIC ACID
lig 48
ACY
B
560 4ACETIC ACID
lig 49
ACY
B
561 4ACETIC ACID
lig 50
ACY
B
562 4ACETIC ACID
lig 51
ACY
B
563 4ACETIC ACID
lig 52
ACY
B
564 4ACETIC ACID