Analysis of Ligand-Protein Contacts in PDB entry:
1JYV

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 148 ligands in PDB entry 1JYV. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	MG	A	3001	1	MAGNESIUM ION
lig 2	MG	A	3002	1	MAGNESIUM ION
lig 3	MG	A	3003	1	MAGNESIUM ION
lig 4	MG	A	3005	1	MAGNESIUM ION
lig 5	MG	A	3105	1	MAGNESIUM ION
lig 6	NA	A	3101	1	SODIUM ION
lig 7	NA	A	3102	1	SODIUM ION
lig 8	NA	A	3103	1	SODIUM ION
lig 9	NA	A	3104	1	SODIUM ION
lig 10	145	A	2001	21	2-NITROPHENYL BETA-D-GALACTOPYRANOSIDE
lig 11	145	A	2002	21	2-NITROPHENYL BETA-D-GALACTOPYRANOSIDE
lig 12	DMS	A	8401	4	DIMETHYL SULFOXIDE
lig 13	DMS	A	8402	4	DIMETHYL SULFOXIDE
lig 14	DMS	A	8403	4	DIMETHYL SULFOXIDE
lig 15	DMS	A	8404	4	DIMETHYL SULFOXIDE
lig 16	DMS	A	8405	4	DIMETHYL SULFOXIDE
lig 17	DMS	A	8406	4	DIMETHYL SULFOXIDE
lig 18	DMS	A	8407	4	DIMETHYL SULFOXIDE
lig 19	DMS	A	8408	4	DIMETHYL SULFOXIDE
lig 20	DMS	A	8409	4	DIMETHYL SULFOXIDE
lig 21	DMS	A	8410	4	DIMETHYL SULFOXIDE
lig 22	DMS	A	8411	4	DIMETHYL SULFOXIDE
lig 23	DMS	A	8412	4	DIMETHYL SULFOXIDE
lig 24	DMS	A	8413	4	DIMETHYL SULFOXIDE
lig 25	DMS	A	8414	4	DIMETHYL SULFOXIDE
lig 26	DMS	A	8415	4	DIMETHYL SULFOXIDE
lig 27	DMS	A	8416	4	DIMETHYL SULFOXIDE
lig 28	DMS	A	8417	4	DIMETHYL SULFOXIDE
lig 29	DMS	A	8419	4	DIMETHYL SULFOXIDE
lig 30	DMS	A	8420	4	DIMETHYL SULFOXIDE
lig 31	DMS	A	8421	4	DIMETHYL SULFOXIDE
lig 32	DMS	A	8423	4	DIMETHYL SULFOXIDE
lig 33	DMS	A	8425	4	DIMETHYL SULFOXIDE
lig 34	DMS	A	8501	4	DIMETHYL SULFOXIDE
lig 35	DMS	A	8502	4	DIMETHYL SULFOXIDE
lig 36	DMS	A	8503	4	DIMETHYL SULFOXIDE
lig 37	DMS	A	8504	4	DIMETHYL SULFOXIDE
lig 38	DMS	A	8602	4	DIMETHYL SULFOXIDE
lig 39	MG	B	3001	1	MAGNESIUM ION
lig 40	MG	B	3002	1	MAGNESIUM ION
lig 41	MG	B	3003	1	MAGNESIUM ION
lig 42	MG	B	3105	1	MAGNESIUM ION
lig 43	NA	B	3101	1	SODIUM ION
lig 44	NA	B	3102	1	SODIUM ION
lig 45	NA	B	3103	1	SODIUM ION
lig 46	NA	B	3104	1	SODIUM ION
lig 47	145	B	2001	21	2-NITROPHENYL BETA-D-GALACTOPYRANOSIDE
lig 48	145	B	2002	21	2-NITROPHENYL BETA-D-GALACTOPYRANOSIDE
lig 49	DMS	B	8401	4	DIMETHYL SULFOXIDE
lig 50	DMS	B	8402	4	DIMETHYL SULFOXIDE
lig 51	DMS	B	8403	4	DIMETHYL SULFOXIDE
lig 52	DMS	B	8404	4	DIMETHYL SULFOXIDE
lig 53	DMS	B	8405	4	DIMETHYL SULFOXIDE
lig 54	DMS	B	8407	4	DIMETHYL SULFOXIDE
lig 55	DMS	B	8408	4	DIMETHYL SULFOXIDE
lig 56	DMS	B	8409	4	DIMETHYL SULFOXIDE
lig 57	DMS	B	8410	4	DIMETHYL SULFOXIDE
lig 58	DMS	B	8411	4	DIMETHYL SULFOXIDE
lig 59	DMS	B	8412	4	DIMETHYL SULFOXIDE
lig 60	DMS	B	8413	4	DIMETHYL SULFOXIDE
lig 61	DMS	B	8414	4	DIMETHYL SULFOXIDE
lig 62	DMS	B	8415	4	DIMETHYL SULFOXIDE
lig 63	DMS	B	8416	4	DIMETHYL SULFOXIDE
lig 64	DMS	B	8417	4	DIMETHYL SULFOXIDE
lig 65	DMS	B	8419	4	DIMETHYL SULFOXIDE
lig 66	DMS	B	8420	4	DIMETHYL SULFOXIDE
lig 67	DMS	B	8421	4	DIMETHYL SULFOXIDE
lig 68	DMS	B	8423	4	DIMETHYL SULFOXIDE
lig 69	DMS	B	8425	4	DIMETHYL SULFOXIDE
lig 70	DMS	B	8502	4	DIMETHYL SULFOXIDE
lig 71	DMS	B	8504	4	DIMETHYL SULFOXIDE
lig 72	DMS	B	8508	4	DIMETHYL SULFOXIDE
lig 73	DMS	B	8601	4	DIMETHYL SULFOXIDE
lig 74	MG	C	3001	1	MAGNESIUM ION
lig 75	MG	C	3002	1	MAGNESIUM ION
lig 76	MG	C	3006	1	MAGNESIUM ION
lig 77	MG	C	3105	1	MAGNESIUM ION
lig 78	NA	C	3101	1	SODIUM ION
lig 79	NA	C	3102	1	SODIUM ION
lig 80	NA	C	3103	1	SODIUM ION
lig 81	NA	C	3104	1	SODIUM ION
lig 82	145	C	2001	21	2-NITROPHENYL BETA-D-GALACTOPYRANOSIDE
lig 83	145	C	2002	21	2-NITROPHENYL BETA-D-GALACTOPYRANOSIDE
lig 84	DMS	C	8401	4	DIMETHYL SULFOXIDE
lig 85	DMS	C	8402	4	DIMETHYL SULFOXIDE
lig 86	DMS	C	8403	4	DIMETHYL SULFOXIDE
lig 87	DMS	C	8404	4	DIMETHYL SULFOXIDE
lig 88	DMS	C	8405	4	DIMETHYL SULFOXIDE
lig 89	DMS	C	8407	4	DIMETHYL SULFOXIDE
lig 90	DMS	C	8408	4	DIMETHYL SULFOXIDE
lig 91	DMS	C	8409	4	DIMETHYL SULFOXIDE
lig 92	DMS	C	8410	4	DIMETHYL SULFOXIDE
lig 93	DMS	C	8411	4	DIMETHYL SULFOXIDE
lig 94	DMS	C	8412	4	DIMETHYL SULFOXIDE
lig 95	DMS	C	8413	4	DIMETHYL SULFOXIDE
lig 96	DMS	C	8414	4	DIMETHYL SULFOXIDE
lig 97	DMS	C	8415	4	DIMETHYL SULFOXIDE
lig 98	DMS	C	8416	4	DIMETHYL SULFOXIDE
lig 99	DMS	C	8417	4	DIMETHYL SULFOXIDE
lig 100	DMS	C	8419	4	DIMETHYL SULFOXIDE
lig 101	DMS	C	8420	4	DIMETHYL SULFOXIDE
lig 102	DMS	C	8421	4	DIMETHYL SULFOXIDE
lig 103	DMS	C	8423	4	DIMETHYL SULFOXIDE
lig 104	DMS	C	8425	4	DIMETHYL SULFOXIDE
lig 105	DMS	C	8501	4	DIMETHYL SULFOXIDE
lig 106	DMS	C	8503	4	DIMETHYL SULFOXIDE
lig 107	DMS	C	8504	4	DIMETHYL SULFOXIDE
lig 108	DMS	C	8601	4	DIMETHYL SULFOXIDE
lig 109	DMS	C	8602	4	DIMETHYL SULFOXIDE
lig 110	DMS	C	8705	4	DIMETHYL SULFOXIDE
lig 111	MG	D	3001	1	MAGNESIUM ION
lig 112	MG	D	3002	1	MAGNESIUM ION
lig 113	MG	D	3005	1	MAGNESIUM ION
lig 114	MG	D	3105	1	MAGNESIUM ION
lig 115	NA	D	3101	1	SODIUM ION
lig 116	NA	D	3102	1	SODIUM ION
lig 117	NA	D	3103	1	SODIUM ION
lig 118	NA	D	3104	1	SODIUM ION
lig 119	145	D	2001	21	2-NITROPHENYL BETA-D-GALACTOPYRANOSIDE
lig 120	145	D	2002	21	2-NITROPHENYL BETA-D-GALACTOPYRANOSIDE
lig 121	DMS	D	8401	4	DIMETHYL SULFOXIDE
lig 122	DMS	D	8402	4	DIMETHYL SULFOXIDE
lig 123	DMS	D	8403	4	DIMETHYL SULFOXIDE
lig 124	DMS	D	8404	4	DIMETHYL SULFOXIDE
lig 125	DMS	D	8405	4	DIMETHYL SULFOXIDE
lig 126	DMS	D	8406	4	DIMETHYL SULFOXIDE
lig 127	DMS	D	8407	4	DIMETHYL SULFOXIDE
lig 128	DMS	D	8408	4	DIMETHYL SULFOXIDE
lig 129	DMS	D	8409	4	DIMETHYL SULFOXIDE
lig 130	DMS	D	8410	4	DIMETHYL SULFOXIDE
lig 131	DMS	D	8411	4	DIMETHYL SULFOXIDE
lig 132	DMS	D	8412	4	DIMETHYL SULFOXIDE
lig 133	DMS	D	8413	4	DIMETHYL SULFOXIDE
lig 134	DMS	D	8414	4	DIMETHYL SULFOXIDE
lig 135	DMS	D	8415	4	DIMETHYL SULFOXIDE
lig 136	DMS	D	8416	4	DIMETHYL SULFOXIDE
lig 137	DMS	D	8417	4	DIMETHYL SULFOXIDE
lig 138	DMS	D	8419	4	DIMETHYL SULFOXIDE
lig 139	DMS	D	8420	4	DIMETHYL SULFOXIDE
lig 140	DMS	D	8421	4	DIMETHYL SULFOXIDE
lig 141	DMS	D	8423	4	DIMETHYL SULFOXIDE
lig 142	DMS	D	8425	4	DIMETHYL SULFOXIDE
lig 143	DMS	D	8501	4	DIMETHYL SULFOXIDE
lig 144	DMS	D	8503	4	DIMETHYL SULFOXIDE
lig 145	DMS	D	8508	4	DIMETHYL SULFOXIDE
lig 146	DMS	D	8701	4	DIMETHYL SULFOXIDE
lig 147	DMS	D	8703	4	DIMETHYL SULFOXIDE
lig 148	DMS	D	8705	4	DIMETHYL SULFOXIDE

Analysis of Ligand-Protein Contacts in PDB entry: 1JYV

Analysis of Ligand-Protein Contacts in PDB entry:
1JYV